RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 SEC24AO95486 1093 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 SYT1P21579 422 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 CEBPZQ03701 1054 aaKnown RBP24.85■■□□□ 1.57
C9orf3-216ENST00000478603 RESTQ13127 1097 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 ZBTB6Q15916 424 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 ENOX2Q16206 610 aaKnown RBP24.85■■□□□ 1.57
C9orf3-216ENST00000478603 NPAS3Q8IXF0 933 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 RTP3Q9BQQ7 232 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 CYP4F11Q9HBI6 524 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 FOXD4L1Q9NU39 408 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 FBXO2Q9UK22 296 aaPredicted RBP24.85■■□□□ 1.57
C9orf3-216ENST00000478603 PCDHB8Q9UN66 801 aa24.85■■□□□ 1.57
C9orf3-216ENST00000478603 ARHGEF37A1IGU5 675 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 OGTO15294 1046 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 LRG1P02750 347 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 RHOP08100 348 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 ATF2P15336 505 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 RFX1P22670 979 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 LRPAP1P30533 357 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 DDIT3P35638 169 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 SLC5A9Q2M3M2 681 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 ZC2HC1CQ53FD0 456 aaPredicted RBP24.84■■□□□ 1.57
C9orf3-216ENST00000478603 ZNF280DQ6N043 979 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 FAM212AQ96EL1 285 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 CLIC6Q96NY7 704 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 MSTO1Q9BUK6 570 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 RPF1Q9H9Y2 349 aaKnown RBP24.84■■□□□ 1.57
C9orf3-216ENST00000478603 TBC1D17Q9HA65 648 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 SLC2A4RGQ9NR83 387 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 KCNH3Q9ULD8 1083 aa24.84■■□□□ 1.57
C9orf3-216ENST00000478603 UBQLN1Q9UMX0 589 aaKnown RBP24.84■■□□□ 1.57
C9orf3-216ENST00000478603 MRPS23Q9Y3D9 190 aaKnown RBP24.84■■□□□ 1.57
C9orf3-216ENST00000478603 TIMM13Q9Y5L4 95 aaPredicted RBP24.84■■□□□ 1.57
C9orf3-216ENST00000478603 A0A0B4J269 797 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 GPC5P78333 572 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 GTF2BQ00403 316 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 MTSS1LQ765P7 747 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 DYMQ7RTS9 669 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 CCDC105Q8IYK2 499 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 APPL2Q8NEU8 664 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 KXD1Q9BQD3 176 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 ARHGEF3Q9NR81 526 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 INSL5Q9Y5Q6 135 aa24.83■■□□□ 1.57
C9orf3-216ENST00000478603 COL4A3Q01955 1670 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 TISP43B9A030 160 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 ANKRD63C9JTQ0 380 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 SCP2P22307 547 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 ADCY1Q08828 1119 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 KYAT1Q16773 422 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 POTEHQ6S545 545 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 MAP4K3Q8IVH8 894 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 TCEAL8Q8IYN2 117 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 DTWD2Q8NBA8 298 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 MCRS1Q96EZ8 462 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 CORO1BQ9BR76 489 aa24.82■■□□□ 1.56
C9orf3-216ENST00000478603 SRPRBQ9Y5M8 271 aaKnown RBP24.82■■□□□ 1.56
C9orf3-216ENST00000478603 M0QZQ0 153 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 PPEF2O14830 753 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 CEBPBP17676 345 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 PTPN2P17706 415 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 CYP3A5P20815 502 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 TPGS2Q68CL5 300 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 JADE1Q6IE81 842 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 SFR1Q86XK3 245 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 KRI1Q8N9T8 703 aaKnown RBP24.81■■□□□ 1.56
C9orf3-216ENST00000478603 BACH2Q9BYV9 841 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 IKZF4Q9H2S9 585 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 CCDC39Q9UFE4 941 aa24.81■■□□□ 1.56
C9orf3-216ENST00000478603 CPSF3Q9UKF6 684 aaKnown RBP24.81■■□□□ 1.56
C9orf3-216ENST00000478603 GFRA3O60609 400 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 ADRB2P07550 413 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 CPB1P15086 417 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 ACOT2P49753 483 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 YWHAHQ04917 246 aaPredicted RBP24.8■■□□□ 1.56
C9orf3-216ENST00000478603 RNF19BQ6ZMZ0 732 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 TCEAL4Q96EI5 215 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 STK17AQ9UEE5 414 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 AFF4Q9UHB7 1163 aaKnown RBP24.8■■□□□ 1.56
C9orf3-216ENST00000478603 MTMR6Q9Y217 621 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 USP34Q70CQ2 3546 aa24.8■■□□□ 1.56
C9orf3-216ENST00000478603 SCN1AP35498 2009 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 XPOTO43592 962 aaKnown RBP24.79■■□□□ 1.56
C9orf3-216ENST00000478603 NFICP08651 508 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 OR4Q2P0C623 313 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 AARSP49588 968 aaKnown RBP eCLIP24.79■■□□□ 1.56
C9orf3-216ENST00000478603 SPATA1Q5VX52 437 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 RRAGBQ5VZM2 374 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 DSTYKQ6XUX3 929 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 USP28Q96RU2 1077 aa24.79■■□□□ 1.56
C9orf3-216ENST00000478603 AVENQ9NQS1 362 aaPredicted RBP24.79■■□□□ 1.56
C9orf3-216ENST00000478603 ZFHX2Q9C0A1 2572 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-216ENST00000478603 MYMKA6NI61 221 aa24.78■■□□□ 1.56
C9orf3-216ENST00000478603 NRG2O14511 850 aaPredicted RBP24.78■■□□□ 1.56
C9orf3-216ENST00000478603 OAZ2O95190 189 aa24.78■■□□□ 1.56
C9orf3-216ENST00000478603 DCNP07585 359 aaKnown RBP24.78■■□□□ 1.56
C9orf3-216ENST00000478603 TWF1Q12792 350 aa24.78■■□□□ 1.56
C9orf3-216ENST00000478603 SNW1Q13573 536 aaKnown RBP24.78■■□□□ 1.56
C9orf3-216ENST00000478603 ANGPT1Q15389 498 aa24.78■■□□□ 1.56
C9orf3-216ENST00000478603 PRSS36Q5K4E3 855 aa24.78■■□□□ 1.56
C9orf3-216ENST00000478603 ADALQ6DHV7 355 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms