RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 TBC1D32Q96NH3 1257 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 REEP2Q9BRK0 252 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 ZHX3Q9H4I2 956 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 RPF1Q9H9Y2 349 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 DNMT3BQ9UBC3 853 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 AFF4Q9UHB7 1163 aaKnown RBP15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 FBXL5Q9UKA1 691 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 TBX20Q9UMR3 447 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 INSL5Q9Y5Q6 135 aa15.73■□□□□ 0.11
SMARCE1-209ENST00000478349 WDFY4Q6ZS81 3184 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 WDR27A2RRH5 827 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 PRR23AA6NEV1 266 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 OGTO15294 1046 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 PI15O43692 258 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 TRAK2O60296 914 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 PIGRP01833 764 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 LRPAP1P30533 357 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 STARD6P59095 220 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 MRPL58Q14197 206 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 MLF2Q15773 248 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 FRMD5Q7Z6J6 570 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 KRI1Q8N9T8 703 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 BEST2Q8NFU1 509 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 PJA1Q8NG27 643 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 LARP4BQ92615 738 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 DDX12PQ92771 950 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 ZBTB45Q96K62 511 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 ZNF512Q96ME7 567 aaPredicted RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 BCO2Q9BYV7 579 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 CCDC39Q9UFE4 941 aa15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 MRPS17Q9Y2R5 130 aaKnown RBP15.72■□□□□ 0.11
SMARCE1-209ENST00000478349 KANSL1LA0AUZ9 987 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 TTC26A0AVF1 554 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 VPS37CA5D8V6 355 aaPredicted RBP15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 OR6C75A6NL08 312 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 NCAM2O15394 837 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 PLCG1P19174 1290 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 ZNF131P52739 623 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 GPC5P78333 572 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 DHX8Q14562 1220 aaKnown RBP15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 SLFN12LQ6IEE8 588 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 DSTYKQ6XUX3 929 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 ING5Q8WYH8 240 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 RAD54LQ92698 747 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 BORCS6Q96GS4 357 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 NELL2Q99435 816 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 KXD1Q9BQD3 176 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 CORO1BQ9BR76 489 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 MSTO1Q9BUK6 570 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 OSBPL6Q9BZF3 934 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 ASAH2Q9NR71 780 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 HCFC1R1Q9NWW0 138 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 STK17AQ9UEE5 414 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 TUBGCP4Q9UGJ1 667 aa15.71■□□□□ 0.11
SMARCE1-209ENST00000478349 M0QZQ0 153 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 TBC1D4O60343 1298 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 ODC1P11926 461 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 ADCY1Q08828 1119 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 SF3A1Q15459 793 aaKnown RBP15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 SEZ6Q53EL9 994 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 ARSHQ5FYA8 562 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 SPECC1Q5M775 1068 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 MAP4K3Q8IVH8 894 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 KCNG4Q8TDN1 519 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 DNASE1L2Q92874 299 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 ELSPBP1Q96BH3 223 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 HVCN1Q96D96 273 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 DERAQ9Y315 318 aa15.7■□□□□ 0.1
SMARCE1-209ENST00000478349 ZFHX2Q9C0A1 2572 aaPredicted RBP15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 A0A0B4J269 797 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 NPHP3-ACAD11A0A0J9YXS1 232 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 OAZ2O95190 189 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 CD2BP2O95400 341 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 FGF19O95750 216 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 TYMPP19971 482 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 POU5F1Q01860 360 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 SNW1Q13573 536 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 MCM6Q14566 821 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 UBXN2BQ14CS0 331 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 KARSQ15046 597 aaKnown RBP15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 SLC44A4Q53GD3 710 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 ASCL5Q7RTU5 278 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 C1orf210Q8IVY1 113 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 E2F7Q96AV8 911 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 MCRS1Q96EZ8 462 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 CCSER1Q9C0I3 900 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 GPR88Q9GZN0 384 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 ZFP14Q9HCL3 533 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 SEL1LQ9UBV2 794 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 DSEQ9UL01 958 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 EXOC7Q9UPT5 735 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 MYO10Q9HD67 2058 aa15.69■□□□□ 0.1
SMARCE1-209ENST00000478349 DCNP07585 359 aaKnown RBP15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 CEBPBP17676 345 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 ALDH1A3P47895 512 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 AARSP49588 968 aaKnown RBP eCLIP15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 EPHB3P54753 998 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 GTF2BQ00403 316 aa15.68■□□□□ 0.1
SMARCE1-209ENST00000478349 TWF1Q12792 350 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms