RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 DDX12PQ92771 950 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 TBC1D32Q96NH3 1257 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 CYP4F11Q9HBI6 524 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 LTB4R2Q9NPC1 389 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 ANKFY1Q9P2R3 1169 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 TUBGCP4Q9UGJ1 667 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 NUB1Q9Y5A7 615 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 INSL5Q9Y5Q6 135 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 COL4A2P08572 1712 aa18.25■□□□□ 0.51
TRIM13-208ENST00000478111 NPHP3-ACAD11A0A0J9YXS1 232 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 FAM170BA6NMN3 283 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 PRRG1O14668 218 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 PLA2G4BP0C869 781 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 STRN3Q13033 797 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 ZBTB6Q15916 424 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 CTXN3Q4LDR2 81 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 TMEM119Q4V9L6 283 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 KCNG4Q8TDN1 519 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 LRRC15Q8TF66 581 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 KCNN1Q92952 543 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 ELSPBP1Q96BH3 223 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 CORO1BQ9BR76 489 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 KCNG1Q9UIX4 513 aa18.24■□□□□ 0.51
TRIM13-208ENST00000478111 TICRRQ7Z2Z1 1910 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 TTC26A0AVF1 554 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 VWA3AA6NCI4 1184 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 CLDN3O15551 220 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 MOSPD3O75425 235 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 MICAL2O94851 1124 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 CXCL8P10145 99 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 SMTNP53814 917 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 NCKAP1LP55160 1127 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 CACNB1Q02641 598 aaPredicted RBP18.23■□□□□ 0.51
TRIM13-208ENST00000478111 SPAG1Q07617 926 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 FZD5Q13467 585 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 UBXN2BQ14CS0 331 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 CLDN23Q96B33 292 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 BCO2Q9BYV7 579 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 KCND2Q9NZV8 630 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 CEP72Q9P209 647 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 AFF4Q9UHB7 1163 aaKnown RBP18.23■□□□□ 0.51
TRIM13-208ENST00000478111 PCDHB8Q9UN66 801 aa18.23■□□□□ 0.51
TRIM13-208ENST00000478111 M0QZQ0 153 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 FAM189A1O60320 539 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 CD2BP2O95400 341 aaKnown RBP18.22■□□□□ 0.51
TRIM13-208ENST00000478111 VNN2O95498 520 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 TARSP26639 723 aaKnown RBP18.22■□□□□ 0.51
TRIM13-208ENST00000478111 LRPAP1P30533 357 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 MCM4P33991 863 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 ID4P47928 161 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 FOXK2Q01167 660 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 ADCY1Q08828 1119 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 ZNF528Q3MIS6 628 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 FAM78AQ5JUQ0 283 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 ARL6IP4Q66PJ3 421 aaKnown RBP18.22■□□□□ 0.51
TRIM13-208ENST00000478111 ZNF280DQ6N043 979 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 RNF19BQ6ZMZ0 732 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 HS6ST3Q8IZP7 471 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 SUMF1Q8NBK3 374 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 APPL2Q8NEU8 664 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 TMX3Q96JJ7 454 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 ZSWIM3Q96MP5 696 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 PLEKHA5Q9HAU0 1116 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 HEBP1Q9NRV9 189 aa18.22■□□□□ 0.51
TRIM13-208ENST00000478111 CLTAP09496 248 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 GJB2P29033 226 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 TNFSF9P41273 254 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 AARSP49588 968 aaKnown RBP eCLIP18.21■□□□□ 0.518e-6■■■■■ 52.4
TRIM13-208ENST00000478111 EPHA5P54756 1037 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 RABEP1Q15276 862 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 ZC3H14Q6PJT7 736 aaKnown RBP18.21■□□□□ 0.51
TRIM13-208ENST00000478111 TPRG1Q6ZUI0 275 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 HAUS6Q7Z4H7 955 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 ZNF687Q8N1G0 1237 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 BEST2Q8NFU1 509 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 ASB16Q96NS5 453 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
TRIM13-208ENST00000478111 FBXO4Q9UKT5 387 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 MAFFQ9ULX9 164 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
TRIM13-208ENST00000478111 SCN1AP35498 2009 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 ZNF197O14709 1029 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 OAZ2O95190 189 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 ADRB2P07550 413 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 CYP3A5P20815 502 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 TWF1Q12792 350 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 ZBTB41Q5SVQ8 909 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 PDZD4Q76G19 769 aaPredicted RBP18.2■□□□□ 0.5
TRIM13-208ENST00000478111 DNASE1L2Q92874 299 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 NELL2Q99435 816 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 REEP2Q9BRK0 252 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 LRRC3Q9BY71 257 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 ZFP14Q9HCL3 533 aa18.2■□□□□ 0.5
TRIM13-208ENST00000478111 LARSQ9P2J5 1176 aaKnown RBP18.2■□□□□ 0.5
TRIM13-208ENST00000478111 TIMM13Q9Y5L4 95 aaPredicted RBP18.2■□□□□ 0.5
TRIM13-208ENST00000478111 LACTBL1A8MY62 500 aa18.19■□□□□ 0.5
TRIM13-208ENST00000478111 LAMTOR5O43504 91 aa18.19■□□□□ 0.5
TRIM13-208ENST00000478111 PIGRP01833 764 aa18.19■□□□□ 0.5
TRIM13-208ENST00000478111 GJA1P17302 382 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms