RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 TOPORSQ9NS56 1045 aaPredicted RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 HDAC6Q9UBN7 1215 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.5□□□□□ -1.05
VMA21-203ENST00000477649 PLXNA1Q9UIW2 1896 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 GJD2Q9UKL4 321 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 CEP83Q9Y592 693 aa8.5□□□□□ -1.05
VMA21-203ENST00000477649 V9GYY5 206 aaPredicted RBP8.5□□□□□ -1.05
VMA21-203ENST00000477649 A0A087WZ62 844 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 FAM155AB1AL88 458 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 PGRMC1O00264 195 aaKnown RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 MED7O43513 233 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 XPOTO43592 962 aaKnown RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 VNN1O95497 513 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 CYP1A1P04798 512 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 ZNF286BP0CG31 522 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 PNMA6AP0CW24 399 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 UNGP13051 313 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 CHRNB2P17787 502 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 ACO1P21399 889 aaKnown RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 GRM5P41594 1212 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 NSFP46459 744 aaKnown RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 ZNF132P52740 706 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 CENPCQ03188 943 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 TAP1Q03518 808 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 GPS2Q13227 327 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 MFSD10Q14728 455 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 ZNF699Q32M78 642 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 MARCH8Q5T0T0 291 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 FAM43BQ6ZT52 329 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 ZBTB33Q86T24 672 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 NT5DC3Q86UY8 548 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 SLC47A2Q86VL8 602 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 PHF13Q86YI8 300 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 RASGEF1CQ8N431 466 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 EFCAB3Q8N7B9 438 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 LRRN4CLQ8ND94 238 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 TRAPPC12Q8WVT3 735 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 KAT5Q92993 513 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 ACAP3Q96P50 834 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.49□□□□□ -1.05
VMA21-203ENST00000477649 FDXACB1Q9BRP7 624 aaPredicted RBP8.49□□□□□ -1.05
VMA21-203ENST00000477649 THAP2Q9H0W7 228 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 WNT8AQ9H1J5 351 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 PDZD7Q9H5P4 517 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 ANKZF1Q9H8Y5 726 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 OGFRQ9NZT2 677 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 CTTNBP2NLQ9P2B4 639 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 ITGA11Q9UKX5 1188 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 KIAA1257Q9ULG3 409 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 STXBP5LQ9Y2K9 1186 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 PCDHB4Q9Y5E5 795 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 SCINQ9Y6U3 715 aa8.49□□□□□ -1.05
VMA21-203ENST00000477649 GOLGA6L10A0A0M3HER8 536 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 CCDC66A2RUB6 948 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 TMEM88BA6NKF7 163 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 TMCO5BA8MYB1 307 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 KCNK3O14649 394 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 BUB1BO60566 1050 aaPredicted RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 TSPAN1O60635 241 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 SRGAP2O75044 1071 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 ZRANB2O95218 330 aaKnown RBP eCLIP8.48□□□□□ -1.05
VMA21-203ENST00000477649 FTCDO95954 541 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 EDN1P05305 212 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 MMEP08473 750 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 PAEPP09466 180 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 STAG3L1P0CL83 205 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 SMIM10L2AP0DMW4 78 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 SMIM10L2BP0DMW5 78 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 HARSP12081 509 aaKnown RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 ARF4P18085 180 aaPredicted RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 ABCB4P21439 1286 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 EIF4BP23588 611 aaKnown RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 TNFRSF8P28908 595 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 PSEN2P49810 448 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 YARSP54577 528 aaKnown RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 ADAM17P78536 824 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 RBP5P82980 135 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 TFAMQ00059 246 aaKnown RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 NOGQ13253 232 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 NAA30Q147X3 362 aaPredicted RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 ZNF667Q5HYK9 610 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 GJC2Q5T442 439 aaPredicted RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 CC2D1AQ6P1N0 951 aaPredicted RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 NOTUMQ6P988 496 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 SLC27A1Q6PCB7 646 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 HDXQ7Z353 690 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 THNSL1Q8IYQ7 743 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 UBR7Q8N806 425 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 RBBP8NLQ8NC74 664 aaPredicted RBP8.48□□□□□ -1.05
VMA21-203ENST00000477649 OR5B17Q8NGF7 314 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 COG1Q8WTW3 980 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 SLC20A1Q8WUM9 679 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 MAIP1Q8WWC4 291 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 CAPZA3Q96KX2 299 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 PCDHB18PQ96TA0 734 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 MIS12Q9H081 205 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 ADAMTS10Q9H324 1103 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 SLITRK6Q9H5Y7 841 aa8.48□□□□□ -1.05
VMA21-203ENST00000477649 PCDHGC3Q9UN70 934 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms