RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 TACC1O75410 805 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 PARP1P09874 1014 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 NQO1P15559 274 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 EIF2S2P20042 333 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 SMARCA1P28370 1054 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 PBX1P40424 430 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 LIMS1P48059 325 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 KCNC1P48547 511 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 RASSF2P50749 326 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 RTP1P59025 263 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 EIF4A1P60842 406 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 PPP2R2AP63151 447 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 HDLBPQ00341 1268 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 SULT2A1Q06520 285 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 KRTAP1-1Q07627 177 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 SLC39A6Q13433 755 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 PRPF4BQ13523 1007 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 CUL1Q13616 776 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 TOB2Q14106 344 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 MYBPC3Q14896 1274 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 SLC39A14Q15043 492 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 ADRM1Q16186 407 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 SKIDA1Q1XH10 827 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 PARP6Q2NL67 630 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 BBS9Q3SYG4 887 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 GNPTABQ3T906 1256 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 SPDYAQ5MJ70 313 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 ZFYVE27Q5T4F4 411 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 OLFML2BQ68BL8 750 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 FAM173BQ6P4H8 233 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 KLC3Q6P597 504 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 RAD9BQ6WBX8 426 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 ADGRG2Q8IZP9 1017 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 RNF10Q8N5U6 811 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 NECAB1Q8N987 351 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 C8orf58Q8NAV2 365 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 KLHDC4Q8TBB5 520 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 PIP4K2CQ8TBX8 421 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 KIFAP3Q92845 792 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 CHMP6Q96FZ7 201 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 TCTN2Q96GX1 697 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 ZNF496Q96IT1 587 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 ZNF570Q96NI8 536 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 NEK1Q96PY6 1258 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 NR1H4Q96RI1 486 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 TCHPQ9BT92 498 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 TMBIM4Q9HC24 238 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 KCNMB3Q9NPA1 279 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 RMND1Q9NWS8 449 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 MIS18AQ9NYP9 233 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 TMOD4Q9NZQ9 345 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 CCNL1Q9UK58 526 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 TCFL5Q9UL49 500 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 LRCH1Q9Y2L9 728 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 LUC7L2Q9Y383 392 aaKnown RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 C2CD2Q9Y426 696 aa5.09□□□□□ -1.59
PTCD3-212ENST00000477520 EPN1Q9Y6I3 576 aaPredicted RBP5.09□□□□□ -1.59
PTCD3-212ENST00000477520 EP400Q96L91 3159 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 A0A1W2PQC6 194 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 FRMD3A2A2Y4 597 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 K7ESM1 405 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 DNAJA2O60884 412 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 FKTNO75072 461 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SKAP2O75563 359 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 NDUFA10O95299 355 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 MPOP05164 745 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 UBTFL1P0CB47 393 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ATP1A3P13637 1013 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 PFKFB1P16118 471 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ZNF24P17028 368 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 IGFBP6P24592 240 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 HOXA7P31268 230 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 PCK1P35558 622 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 HSPA9P38646 679 aaKnown RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SARSP49591 514 aaKnown RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 PDE6CP51160 858 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 PLCD1P51178 756 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ADKP55263 362 aaKnown RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ZXDAP98168 799 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 CCDC15Q0P6D6 951 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 MPP3Q13368 585 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ITGA9Q13797 1035 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 PPP2R5EQ16537 467 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 CLPPQ16740 277 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 TXNRD1Q16881 649 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ADCK5Q3MIX3 580 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 TTMPQ5BVD1 217 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 WASHC2DQ5SRD0 308 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ANO1Q5XXA6 986 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 OTUD6AQ7L8S5 288 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 TRPM8Q7Z2W7 1104 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 TMC3Q7Z5M5 1100 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 PIGWQ7Z7B1 504 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 HOOK3Q86VS8 718 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ERICH1Q86X53 443 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 ATP8B4Q8TF62 1192 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 IFT81Q8WYA0 676 aa5.08□□□□□ -1.6
PTCD3-212ENST00000477520 RIN2Q8WYP3 895 aaPredicted RBP5.08□□□□□ -1.6
PTCD3-212ENST00000477520 DPF2Q92785 391 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms