RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 PIRO00625 290 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 IKBKBO14920 756 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 SYN3O14994 580 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 DLATP10515 647 aaKnown RBP14.18□□□□□ -0.14
TOP3A-205ENST00000477508 EPB41P11171 864 aaKnown RBP14.18□□□□□ -0.14
TOP3A-205ENST00000477508 KRT13P13646 458 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 CD44P16070 742 aaKnown RBP14.18□□□□□ -0.14
TOP3A-205ENST00000477508 GLUD2P49448 558 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 CASP4P49662 377 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 NLRP12P59046 1061 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 CLDN10P78369 228 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 RBP5P82980 135 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 DSG1Q02413 1049 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 FAM171A1Q5VUB5 890 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 PLPP4Q5VZY2 271 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 KLHL10Q6JEL2 608 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 ZC3H3Q8IXZ2 948 aaKnown RBP14.18□□□□□ -0.14
TOP3A-205ENST00000477508 FAM186BQ8IYM0 893 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 LRRC52Q8N7C0 313 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 MAFAQ8NHW3 353 aaPredicted RBP14.18□□□□□ -0.14
TOP3A-205ENST00000477508 PARD3BQ8TEW8 1205 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 NELFBQ8WX92 580 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 SUSD3Q96L08 255 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 ZNF560Q96MR9 790 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 CEP63Q96MT8 703 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 TTPALQ9BTX7 342 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 VN1R3Q9BXE9 311 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 EMILIN2Q9BXX0 1053 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 GPR62Q9BZJ7 368 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 TLE6Q9H808 572 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 CACNG4Q9UBN1 327 aa14.18□□□□□ -0.14
TOP3A-205ENST00000477508 C2orf71A6NGG8 1288 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 F8W810 466 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 SLC16A3O15427 465 aaKnown RBP14.17□□□□□ -0.14
TOP3A-205ENST00000477508 AKAP3O75969 853 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 C1RP00736 705 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 FGFR3P22607 806 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 IRS1P35568 1242 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 AARSP49588 968 aaKnown RBP eCLIP14.17□□□□□ -0.14
TOP3A-205ENST00000477508 WNT7BP56706 349 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 LILRA4P59901 499 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 PTPN14Q15678 1187 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 KLHL40Q2TBA0 621 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 SKOR2Q2VWA4 1001 aaPredicted RBP14.17□□□□□ -0.14
TOP3A-205ENST00000477508 SV2CQ496J9 727 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 TCEAL5Q5H9L2 206 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 KIAA0319Q5VV43 1072 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 TTI2Q6NXR4 508 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 SASS6Q6UVJ0 657 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 PPFIBP1Q86W92 1011 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 MICALL1Q8N3F8 863 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 CSGALNACT2Q8N6G5 542 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 C3orf58Q8NDZ4 430 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 APPL2Q8NEU8 664 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 HASPINQ8TF76 798 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 PIK3R5Q8WYR1 880 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 MTMR12Q9C0I1 747 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 METTL14Q9HCE5 456 aaKnown RBP14.17□□□□□ -0.14
TOP3A-205ENST00000477508 RWDD2AQ9UIY3 292 aa14.17□□□□□ -0.14
TOP3A-205ENST00000477508 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-205ENST00000477508 STX10O60499 249 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 LILRB3O75022 631 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 LETM1O95202 739 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-205ENST00000477508 GNA14O95837 355 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 ITGB3P05106 788 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 ERCC5P28715 1186 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-205ENST00000477508 GTF2H1P32780 548 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 CA8P35219 290 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 TAF6P49848 677 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 VAMP7P51809 220 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 GUCY2FP51841 1108 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 PMS1P54277 932 aaKnown RBP14.16□□□□□ -0.14
TOP3A-205ENST00000477508 MCCD1P59942 119 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-205ENST00000477508 BFSP1Q12934 665 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 MYO1EQ12965 1108 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 CD300LGQ6UXG3 332 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 ANKS3Q6ZW76 656 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 TAS1R1Q7RTX1 841 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 TRAPPC11Q7Z392 1133 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 FILIP1Q7Z7B0 1213 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 C1orf127Q8N9H9 656 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 OXCT2Q9BYC2 517 aaPredicted RBP14.16□□□□□ -0.14
TOP3A-205ENST00000477508 RXFP1Q9HBX9 757 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 FNIP2Q9P278 1114 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 AGAP1Q9UPQ3 857 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 CTNND2Q9UQB3 1225 aa14.16□□□□□ -0.14
TOP3A-205ENST00000477508 TRIM49BA6NDI0 452 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 HIDE1A8MVS5 230 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 H7C4K7 107 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 M0QZQ0 153 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 PHACTR2O75167 634 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 ADH1AP07327 375 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 KRT19P08727 400 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 SRGAP2BP0DMP2 458 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 ODC1P11926 461 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 POLR2BP30876 1174 aaKnown RBP14.15□□□□□ -0.14
TOP3A-205ENST00000477508 BRCC3P46736 316 aa14.15□□□□□ -0.14
TOP3A-205ENST00000477508 CCDC85BQ15834 202 aaPredicted RBP14.15□□□□□ -0.14
TOP3A-205ENST00000477508 DUSP6Q16828 381 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms