RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 Q9Y3F1 56 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 PMM2O15305 246 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 KRT86O43790 486 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 CHRNA1P02708 482 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 ITGB3P05106 788 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 CYP11B1P15538 503 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 GTF2H1P32780 548 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 TMEM270Q6UE05 265 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 DDX1Q92499 740 aaKnown RBP12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 RABGGTAQ92696 567 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 CAPZA3Q96KX2 299 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 GCOM2Q9BZD3 368 aaPredicted RBP12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 UPF3AQ9H1J1 476 aaKnown RBP12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 GOLGA2P5Q9HBQ8 144 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 C1orf112Q9NSG2 853 aa12.7□□□□□ -0.38
TNRC6A-206ENST00000477487 TMEM191BP0C7N4 346 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 NAB2Q15742 525 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 MAP3K21Q5TCX8 1036 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 FAM228AQ86W67 206 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 WDR49Q8IV35 697 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 KLHDC9Q8NEP7 349 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 AGO3Q9H9G7 860 aaKnown RBP12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 TUBGCP4Q9UGJ1 667 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 MRFAP1Q9Y605 127 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 CDY2AQ9Y6F7 541 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 HCRTO43612 131 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 PALMO75781 387 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 CLTAP09496 248 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 TNFAIP3P21580 790 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 MFAP3P55082 362 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 AMPD2Q01433 879 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 POU5F1BQ06416 359 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 CUL2Q13617 745 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 UBXN11Q5T124 520 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 ZNF410Q86VK4 478 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 ERO1AQ96HE7 468 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 MYO6Q9UM54 1294 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 COG5Q9UP83 839 aa12.69□□□□□ -0.38
TNRC6A-206ENST00000477487 PJA2O43164 708 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 ASS1P00966 412 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 MCF2P10911 925 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 MRPS25P82663 173 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 NFX1Q12986 1120 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 DUOXA2Q1HG44 320 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 SRGAP1Q7Z6B7 1085 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 MTERF4Q7Z6M4 381 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 COG1Q8WTW3 980 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 BTBD6Q96KE9 485 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 NAPGQ99747 312 aaPredicted RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 HINFPQ9BQA5 517 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 LPIN3Q9BQK8 851 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 SMYD3Q9H7B4 428 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 GRID2IPA4D2P6 1211 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 PDE2AO00408 941 aaPredicted RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 GJB6O95452 261 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 HMGCRP04035 888 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 POLR2BP30876 1174 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 ABCD1P33897 745 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 MTFR1Q15390 333 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 ERCC6LQ2NKX8 1250 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 LHX8Q68G74 356 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 PDCL2Q8N4E4 241 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 CPA5Q8WXQ8 436 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 LPPQ93052 612 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 TWNKQ96RR1 684 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 TRPV6Q9H1D0 765 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 DDX20Q9UHI6 824 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 TRIM17Q9Y577 477 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 PCDHB4Q9Y5E5 795 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 CTAGE9A4FU28 777 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 KIAA0391O15091 583 aaKnown RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 B4GALT4O60513 344 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 RECQL4O94761 1208 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 FTLP02792 175 aaPredicted RBP12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 RINLQ6ZS11 566 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 ZFP42Q96MM3 310 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 TRIM7Q9C029 511 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 PLSCR2Q9NRY7 297 aa12.68□□□□□ -0.38
TNRC6A-206ENST00000477487 TTC36A6NLP5 189 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 MAP2K2P36507 400 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 THPOP40225 353 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 ASPAP45381 313 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 NOP2P46087 812 aaKnown RBP12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 RNASE9P60153 205 aaKnown RBP12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 BMS1Q14692 1282 aaKnown RBP12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 ELF2Q15723 593 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 WDR72Q3MJ13 1102 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 DAB2IPQ5VWQ8 1189 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 USP37Q86T82 979 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 KIF12Q96FN5 646 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 ACAP3Q96P50 834 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 KATNAL1Q9BW62 490 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 CELF4Q9BZC1 486 aaKnown RBP12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 MYO1AQ9UBC5 1043 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 MROH7Q68CQ1 1323 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 GHRP10912 638 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 GCNT1Q02742 428 aa12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 SOX4Q06945 474 aaPredicted RBP12.67□□□□□ -0.38
TNRC6A-206ENST00000477487 PTGISQ16647 500 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms