RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 ALG13Q9NP73 1137 aaKnown RBP5.52□□□□□ -1.53
UBR3-209ENST00000477461 LRIT1Q9P2V4 623 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 HSFX1Q9UBD0 423 aa5.52□□□□□ -1.53
UBR3-209ENST00000477461 ZNF608Q9ULD9 1512 aaPredicted RBP5.52□□□□□ -1.53
UBR3-209ENST00000477461 GRIN2BQ13224 1484 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 CDHR4A6H8M9 788 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 ZFPL1O95159 310 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 IGLV2-14P01704 120 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 RARRES1P49788 294 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 SLC5A3P53794 718 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 MRPS35P82673 323 aaKnown RBP5.51□□□□□ -1.53
UBR3-209ENST00000477461 GEN1Q17RS7 908 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 COLEC12Q5KU26 742 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 FITM2Q8N6M3 262 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 ZNF384Q8TF68 577 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 IL17RBQ9NRM6 502 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 INTUQ9ULD6 942 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 RUSC2Q8N2Y8 1516 aa5.51□□□□□ -1.53
UBR3-209ENST00000477461 MYBBP1AQ9BQG0 1328 aaKnown RBP5.5□□□□□ -1.53
UBR3-209ENST00000477461 ERICH3Q5RHP9 1530 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 DDCP20711 480 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 MTNR1BP49286 362 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 ELLP55199 621 aaPredicted RBP5.5□□□□□ -1.53
UBR3-209ENST00000477461 HNRNPA0Q13151 305 aaKnown RBP5.5□□□□□ -1.53
UBR3-209ENST00000477461 CLUL1Q15846 466 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 SEM1Q6ZVN7 128 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 RHOT1Q8IXI2 618 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 ATL2Q8NHH9 583 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 NRG4Q8WWG1 115 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 FAM126AQ9BYI3 521 aaPredicted RBP5.5□□□□□ -1.53
UBR3-209ENST00000477461 TMEM74BQ9NUR3 256 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 KCNE5Q9UJ90 142 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 GPR45Q9Y5Y3 372 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 CUL7Q14999 1698 aa5.5□□□□□ -1.53
UBR3-209ENST00000477461 LOC105371045A0A1W2PR82 267 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 LRRC3CA6NJW4 275 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 GPR39O43194 453 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 MATN4O95460 622 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 VAV2P52735 878 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 CREMQ03060 361 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 MGAT2Q10469 447 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 MTM1Q13496 603 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 RNF187Q5TA31 235 aaPredicted RBP5.49□□□□□ -1.53
UBR3-209ENST00000477461 ACTRT2Q8TDY3 377 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 CASKIN2Q8WXE0 1202 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 SLC9A6Q92581 669 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 C7orf25Q9BPX7 421 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 SPC25Q9HBM1 224 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 FOXJ2Q9P0K8 574 aa5.49□□□□□ -1.53
UBR3-209ENST00000477461 SETD1BQ9UPS6 1966 aaKnown RBP5.48□□□□□ -1.53
UBR3-209ENST00000477461 SNAPC4Q5SXM2 1469 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 MAGI1Q96QZ7 1491 aaPredicted RBP5.48□□□□□ -1.53
UBR3-209ENST00000477461 CARMIL1Q5VZK9 1371 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 TEX33O43247 280 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 ALAS1P13196 640 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 CPEP16870 476 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 FAPQ12884 760 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 SF3B3Q15393 1217 aaKnown RBP5.48□□□□□ -1.53
UBR3-209ENST00000477461 GJC2Q5T442 439 aaPredicted RBP5.48□□□□□ -1.53
UBR3-209ENST00000477461 CYFIP2Q96F07 1278 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 PNKPQ96T60 521 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 ASB6Q9NWX5 421 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 FAM30AQ9NZY2 134 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 DMTF1Q9Y222 760 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 PCDHA13Q9Y5I0 950 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 WASHC2AQ641Q2 1341 aa5.48□□□□□ -1.53
UBR3-209ENST00000477461 ADAMTS12P58397 1594 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 TRGV11A0A075B6L2 103 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 SBK3P0C264 359 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 FCER1AP12319 257 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 SLFN5Q08AF3 891 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 TSHZ1Q6ZSZ6 1077 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 COLGALT2Q8IYK4 626 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 FAM177A1Q8N128 213 aaPredicted RBP5.47□□□□□ -1.53
UBR3-209ENST00000477461 NSUN7Q8NE18 718 aaKnown RBP5.47□□□□□ -1.53
UBR3-209ENST00000477461 SSH3Q8TE77 659 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 NUP133Q8WUM0 1156 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 FUBP1Q96AE4 644 aaKnown RBP5.47□□□□□ -1.53
UBR3-209ENST00000477461 BRINP2Q9C0B6 783 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 KLK15Q9H2R5 256 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 MANSC1Q9H8J5 431 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 KCTD5Q9NXV2 234 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 FHAD1B1AJZ9 1412 aa5.47□□□□□ -1.53
UBR3-209ENST00000477461 RAPGEF2Q9Y4G8 1499 aa5.46□□□□□ -1.53
UBR3-209ENST00000477461 KIF21BO75037 1637 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 FAM171A2A8MVW0 826 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 PEX1O43933 1283 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 C1RP00736 705 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 SLC6A4P31645 630 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 ERVK-21P61565 698 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 ATP8B2P98198 1209 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 AKNAD1Q5T1N1 836 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 PGM2L1Q6PCE3 622 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 SPATS2Q86XZ4 545 aaKnown RBP5.46□□□□□ -1.54
UBR3-209ENST00000477461 DCBLD1Q8N8Z6 715 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 NELL1Q92832 810 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 TMEM125Q96AQ2 219 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 TMX3Q96JJ7 454 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 PDLIM2Q96JY6 352 aa5.46□□□□□ -1.54
UBR3-209ENST00000477461 TLR10Q9BXR5 811 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms