RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 MYL4P12829 197 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 ATF2P15336 505 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 ARF4P18085 180 aaPredicted RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 CCR2P41597 374 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 DPP6P42658 865 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 QARSP47897 775 aaKnown RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 USP11P51784 963 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 POU5F1BQ06416 359 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 SCAPQ12770 1279 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 GRSF1Q12849 480 aaKnown RBP eCLIP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 HNRNPDQ14103 355 aaKnown RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 PFKFB3Q16875 520 aaPredicted RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 WDR44Q5JSH3 913 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 TPGS2Q68CL5 300 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 PMS2CLQ68D20 193 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 SLC8B1Q6J4K2 584 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 APOA5Q6Q788 366 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 CCDC148Q8NFR7 591 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 EXOC4Q96A65 974 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 ACDQ96AP0 544 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 DDX27Q96GQ7 796 aaKnown RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 ZSWIM3Q96MP5 696 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 BBC3Q96PG8 261 aaPredicted RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 TMEM209Q96SK2 561 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 MTRQ99707 1265 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 NUSAP1Q9BXS6 441 aaKnown RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 OBP2AQ9NY56 170 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 CACNG4Q9UBN1 327 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 EVLQ9UI08 416 aaPredicted RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 MAFFQ9ULX9 164 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 ZNF462Q96JM2 2506 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 MYO16Q9Y6X6 1858 aa8.13□□□□□ -1.11
PRPF3-205ENST00000476970 TNRC6BQ9UPQ9 1833 aaKnown RBP8.13□□□□□ -1.11
PRPF3-205ENST00000476970 TENM4Q6N022 2769 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 NCANO14594 1321 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 CCDC194A0A1B0GVG4 234 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 SPAARA0A1B0GVQ0 90 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 UPK3BL1B0FP48 263 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 UPK3BL2E5RIL1 263 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 H7C4K7 107 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 ZBTB43O43298 467 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 B3GAT3O94766 335 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 ABLIM3O94929 683 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 CAPNS1P04632 268 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 PRKCBP05771 671 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 TKTP29401 623 aaKnown RBP8.12□□□□□ -1.11
PRPF3-205ENST00000476970 EPHA5P54756 1037 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 NPEPPSP55786 919 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 AMPD2Q01433 879 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 MBTD1Q05BQ5 628 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 FUT2Q10981 343 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 PLD1Q13393 1074 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 TEAD2Q15562 447 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 ITPRIPL2Q3MIP1 535 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 Q4G0T1 1027 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 OTUD6AQ7L8S5 288 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 CHD1LQ86WJ1 897 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 HDDC3Q8N4P3 179 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 LRIG1Q96JA1 1093 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 PRIMPOLQ96LW4 560 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 UROC1Q96N76 676 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 HHIPQ96QV1 700 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 UBL7Q96S82 380 aaPredicted RBP8.12□□□□□ -1.11
PRPF3-205ENST00000476970 NFKBIZQ9BYH8 718 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 C22orf23Q9BZE7 217 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 GTSE1Q9NYZ3 720 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
PRPF3-205ENST00000476970 EBF1Q9UH73 591 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 TPCN1Q9ULQ1 816 aa8.12□□□□□ -1.11
PRPF3-205ENST00000476970 CELSR3Q9NYQ7 3312 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 PLXND1Q9Y4D7 1925 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 UNC79Q9P2D8 2635 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 HECTD1Q9ULT8 2610 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 A0A1B0GUA9 196 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 GOLGA8AA7E2F4 631 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 GOLGA8BA8MQT2 603 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 TK2O00142 265 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 NRG2O14511 850 aaPredicted RBP8.11□□□□□ -1.11
PRPF3-205ENST00000476970 PTGESO14684 152 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 RNF40O75150 1001 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 MOSPD3O75425 235 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 HOXC13P31276 330 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 ATXN3P54252 364 aaPredicted RBP8.11□□□□□ -1.11
PRPF3-205ENST00000476970 TWF1Q12792 350 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 AMHR2Q16671 573 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 FBXO43Q4G163 708 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 USP39Q53GS9 565 aaKnown RBP8.11□□□□□ -1.11
PRPF3-205ENST00000476970 TRIM61Q5EBN2 209 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 TMEM196Q5HYL7 178 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 PPP4R3AQ6IN85 833 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 PKN3Q6P5Z2 889 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 B3GNT9Q6UX72 402 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 RAB44Q7Z6P3 723 aaPredicted RBP8.11□□□□□ -1.11
PRPF3-205ENST00000476970 CHCHD4Q8N4Q1 142 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 CCDC26Q8TAB7 109 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 TTC8Q8TAM2 541 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 HNRNPLLQ8WVV9 542 aaKnown RBP8.11□□□□□ -1.11
PRPF3-205ENST00000476970 ADPGKQ9BRR6 497 aa8.11□□□□□ -1.11
PRPF3-205ENST00000476970 THG1LQ9NWX6 298 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms