RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 BRCC3P46736 316 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 ZXDAP98168 799 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 YWHAHQ04917 246 aaPredicted RBP11.08□□□□□ -0.64
CCM2-208ENST00000476594 SIGLEC14Q08ET2 396 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 E2F4Q16254 413 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 CTXN3Q4LDR2 81 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 VARS2Q5ST30 1063 aaKnown RBP11.08□□□□□ -0.64
CCM2-208ENST00000476594 SPATA1Q5VX52 437 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 RESP18Q5W5W9 173 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 TPGS2Q68CL5 300 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 SLC8B1Q6J4K2 584 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 ARMCX5Q6P1M9 558 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 LILRA6Q6PI73 481 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 SHC4Q6S5L8 630 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 ELMOD1Q8N336 334 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 C3orf58Q8NDZ4 430 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 CACTINQ8WUQ7 758 aaKnown RBP11.08□□□□□ -0.64
CCM2-208ENST00000476594 NXPE3Q969Y0 559 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 C18orf25Q96B23 403 aaPredicted RBP11.08□□□□□ -0.64
CCM2-208ENST00000476594 ZNF560Q96MR9 790 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 CLSTN3Q9BQT9 956 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 LRFN3Q9BTN0 628 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 TRIM9Q9C026 710 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 CXCL16Q9H2A7 254 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCM2-208ENST00000476594 TBC1D7Q9P0N9 293 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 TUBGCP4Q9UGJ1 667 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 RCOR1Q9UKL0 485 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 DSEQ9UL01 958 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 PCDHA7Q9UN72 937 aa11.08□□□□□ -0.64
CCM2-208ENST00000476594 TRIP11Q15643 1979 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 C5orf42Q9H799 3197 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 A0A087X0B3 334 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 PVALEFA0A1B0GWK0 134 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 ANKRD63C9JTQ0 380 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 I3L4J1 428 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 PRRG1O14668 218 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 FAM189A1O60320 539 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 RFPL2O75678 378 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 PAPLNO95428 1278 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 MYL1P05976 194 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 SPATA31D3P0C874 917 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 CPB1P15086 417 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 PNPLA4P41247 253 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 ACOT2P49753 483 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 SNRPFP62306 86 aaKnown RBP11.07□□□□□ -0.64
CCM2-208ENST00000476594 SURF1Q15526 300 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 FAM26FQ5R3K3 315 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 AXDND1Q5T1B0 1012 aaPredicted RBP11.07□□□□□ -0.64
CCM2-208ENST00000476594 JADE1Q6IE81 842 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 CNNM4Q6P4Q7 775 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 TRIM67Q6ZTA4 783 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 SPATA31D4Q6ZUB0 917 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 UNC13DQ70J99 1090 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 HS2ST1Q7LGA3 356 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 METTL23Q86XA0 190 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 SUGP1Q8IWZ8 645 aaKnown RBP11.07□□□□□ -0.64
CCM2-208ENST00000476594 ZNF461Q8TAF7 563 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 SLC7A14Q8TBB6 771 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 KHSRPQ92945 711 aaKnown RBP eCLIP11.07□□□□□ -0.64
CCM2-208ENST00000476594 C7orf25Q9BPX7 421 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 STRA6Q9BX79 667 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 HAPLN2Q9GZV7 340 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 KIAA1586Q9HCI6 787 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 IGSF9Q9P2J2 1179 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 KCNH3Q9ULD8 1083 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 POLIQ9UNA4 740 aa11.07□□□□□ -0.64
CCM2-208ENST00000476594 MTCL1Q9Y4B5 1905 aaKnown RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 FAM86C2PA6NEL3 165 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 OR6C75A6NL08 312 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 M0QZQ0 153 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 TULP1O00294 542 aaPredicted RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 EXTL3O43909 919 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 KIF20AO95235 890 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 MYBP10242 640 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 ATF2P15336 505 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 TYMPP19971 482 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 TAF6P49848 677 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 ARPP19P56211 112 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 NUCB2P80303 420 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 ROR1Q01973 937 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 SPAG1Q07617 926 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 PLD1Q13393 1074 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 PKP1Q13835 747 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 ZBTB6Q15916 424 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 SV2CQ496J9 727 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 SLC39A4Q6P5W5 647 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 BMP8AQ7Z5Y6 402 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 GPD1LQ8N335 351 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 NOC3LQ8WTT2 800 aaKnown RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 FAM213AQ9BRX8 229 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 KCNH6Q9H252 994 aa11.06□□□□□ -0.64
CCM2-208ENST00000476594 RBAKQ9NYW8 714 aaPredicted RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 CGNQ9P2M7 1197 aaKnown RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 PDCD11Q14690 1871 aaKnown RBP11.06□□□□□ -0.64
CCM2-208ENST00000476594 GOLGA6L4A6NEF3 574 aa11.05□□□□□ -0.64
CCM2-208ENST00000476594 TMEM221A6NGB7 291 aa11.05□□□□□ -0.64
CCM2-208ENST00000476594 M0R296 226 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms