RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SOX9P48436 509 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 EPHA5P54756 1037 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 MRPL58Q14197 206 aaKnown RBP18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 LRRC32Q14392 662 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 NT5DC1Q5TFE4 455 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 ATF7IP2Q5U623 682 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 TPGS2Q68CL5 300 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 IQCEQ6IPM2 695 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 CEP68Q76N32 757 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 ZNF512Q96ME7 567 aaPredicted RBP18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 MTMR9Q96QG7 549 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 KIFC3Q9BVG8 833 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 C2orf42Q9NWW7 574 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 TICRRQ7Z2Z1 1910 aa18.07■□□□□ 0.48
APOBEC3F-203ENST00000476513 PODXLO00592 558 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 TM4SF5O14894 197 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 MED24O75448 989 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 MYL4P12829 197 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 CYP11B2P19099 503 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 HOXC13P31276 330 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 LIMK1P53667 647 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 SHC2P98077 582 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 TWF1Q12792 350 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 AASDHQ4L235 1098 aaPredicted RBP18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 PADI6Q6TGC4 694 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 ALKAL1Q6UXT8 129 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 CEP120Q8N960 986 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 LEMD2Q8NC56 503 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 CSGALNACT1Q8TDX6 532 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 RSPRY1Q96DX4 576 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 MSANTD3Q96H12 275 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 NACC1Q96RE7 527 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 TM6SF1Q9BZW5 370 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 TUFT1Q9NNX1 390 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 ASAH2Q9NR71 780 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 PDRG1Q9NUG6 133 aa18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 AFF4Q9UHB7 1163 aaKnown RBP18.06■□□□□ 0.48
APOBEC3F-203ENST00000476513 SLC38A8A6NNN8 435 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 KPNA1P52294 538 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 PPP2R5AQ15172 486 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 SF3A2Q15428 464 aaKnown RBP18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 TEAD2Q15562 447 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 CTXN3Q4LDR2 81 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 XKR4Q5GH76 650 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 C1orf228Q6PIY5 440 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 CENPQQ7L2Z9 268 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 SHKBP1Q8TBC3 707 aa18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 C8orf33Q9H7E9 229 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 ORC3Q9UBD5 711 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 DAXXQ9UER7 740 aaPredicted RBP18.05■□□□□ 0.48
APOBEC3F-203ENST00000476513 AXIN1O15169 862 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 CHADO15335 359 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 CTDNEP1O95476 244 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 HOXA6P31267 233 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 GRM5P41594 1212 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 EFNA5P52803 228 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 YARSP54577 528 aaKnown RBP18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 DGKKQ5KSL6 1271 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 TXNDC11Q6PKC3 985 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 APBB1IPQ7Z5R6 666 aaPredicted RBP18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 WDR5BQ86VZ2 330 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 YAF2Q8IY57 180 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 E2F7Q96AV8 911 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 ZMAT2Q96NC0 199 aaKnown RBP18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 CCDC94Q9BW85 323 aaPredicted RBP18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 GPR88Q9GZN0 384 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 TMEM60Q9H2L4 133 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 SLITRK6Q9H5Y7 841 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 POLD4Q9HCU8 107 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 BRMS1Q9HCU9 246 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 TOPORSQ9NS56 1045 aaPredicted RBP18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 RXFP3Q9NSD7 469 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 SLC38A7Q9NVC3 462 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 MAFFQ9ULX9 164 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 TNFSF13BQ9Y275 285 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 NUB1Q9Y5A7 615 aa18.04■□□□□ 0.48
APOBEC3F-203ENST00000476513 MYBPHLA2RUH7 354 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 ARHGEF35A5YM69 484 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 SPECC1L-ADORA2AF8WAN1 911 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 OSTNP61366 133 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 FCHO2Q0JRZ9 810 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 CCDC6Q16204 474 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 RNF19BQ6ZMZ0 732 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 C12orf50Q8NA57 414 aaPredicted RBP18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 WASF1Q92558 559 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 SUSD3Q96L08 255 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 POLR3CQ9BUI4 534 aaPredicted RBP18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 CDT1Q9H211 546 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 ARRDC1-AS1Q9H2J1 176 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 FAM208BQ5VWN6 2430 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 ATRXP46100 2492 aa18.03■□□□□ 0.48
APOBEC3F-203ENST00000476513 SDK1Q7Z5N4 2213 aa18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 PFKFB2O60825 505 aa18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 ZNF806P0C7X5 589 aa18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 FDPSP14324 419 aaKnown RBP18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 CTHP32929 405 aa18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 RALGAPA1Q6GYQ0 2036 aa18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 ZNF280DQ6N043 979 aa18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 RALGPS2Q86X27 583 aaPredicted RBP18.02■□□□□ 0.48
APOBEC3F-203ENST00000476513 TTC8Q8TAM2 541 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms