RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 TMEM119Q4V9L6 283 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 SEZ6Q53EL9 994 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 ZC3H14Q6PJT7 736 aaKnown RBP14.33□□□□□ -0.12
MRPL55-228ENST00000476267 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 LRRC15Q8TF66 581 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 DDX12PQ92771 950 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 TBC1D32Q96NH3 1257 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 CYP4F11Q9HBI6 524 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 NCANO14594 1321 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 TICRRQ7Z2Z1 1910 aa14.33□□□□□ -0.12
MRPL55-228ENST00000476267 TTC26A0AVF1 554 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 FAM170BA6NMN3 283 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 H7C4K7 107 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 M0QZQ0 153 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 LRPAP1P30533 357 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 MAGEA9P43362 315 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 RPS9P46781 194 aaKnown RBP14.32□□□□□ -0.12
MRPL55-228ENST00000476267 AARSP49588 968 aaKnown RBP eCLIP14.32□□□□□ -0.12
MRPL55-228ENST00000476267 NCKAP1LP55160 1127 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 RAD51AP2Q09MP3 1159 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 UBXN2BQ14CS0 331 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 RILPL1Q5EBL4 403 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 ARSHQ5FYA8 562 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 ZNF280DQ6N043 979 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 DNASE1L2Q92874 299 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 ASB16Q96NS5 453 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 CORO1BQ9BR76 489 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 TCHPQ9BT92 498 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 BCO2Q9BYV7 579 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 KCND2Q9NZV8 630 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 CEP72Q9P209 647 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 ANKFY1Q9P2R3 1169 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 AFF4Q9UHB7 1163 aaKnown RBP14.32□□□□□ -0.12
MRPL55-228ENST00000476267 MAFFQ9ULX9 164 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 PCDHB8Q9UN66 801 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 NUB1Q9Y5A7 615 aa14.32□□□□□ -0.12
MRPL55-228ENST00000476267 SPTBN4Q9H254 2564 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 ANK1P16157 1881 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 FAM186AA6NE01 2351 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 GVINP1Q7Z2Y8 2422 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 PRRG1O14668 218 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 ADRB2P07550 413 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 CXCL8P10145 99 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 HARSP12081 509 aaKnown RBP14.31□□□□□ -0.12
MRPL55-228ENST00000476267 ELF1P32519 619 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 MCM4P33991 863 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 ARPP19P56211 112 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 STRN3Q13033 797 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 CTXN3Q4LDR2 81 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 FAM78AQ5JUQ0 283 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 RNF19BQ6ZMZ0 732 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 TPRG1Q6ZUI0 275 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 MAP4K3Q8IVH8 894 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 HS6ST3Q8IZP7 471 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 ZBTB44Q8NCP5 570 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 ZSWIM3Q96MP5 696 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 LRRC3Q9BY71 257 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 PLEKHA5Q9HAU0 1116 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 PRMT8Q9NR22 394 aaPredicted RBP14.31□□□□□ -0.12
MRPL55-228ENST00000476267 HEBP1Q9NRV9 189 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 KCNG1Q9UIX4 513 aa14.31□□□□□ -0.12
MRPL55-228ENST00000476267 NUP210Q8TEM1 1887 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-228ENST00000476267 NPHP3-ACAD11A0A0J9YXS1 232 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 CLDN3O15551 220 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 LILRB5O75023 590 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 OAZ2O95190 189 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 PIGRP01833 764 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 PLA2G4BP0C869 781 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 TNFSF9P41273 254 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 ADCY1Q08828 1119 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 ZBTB41Q5SVQ8 909 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 ARL6IP4Q66PJ3 421 aaKnown RBP14.3□□□□□ -0.12
MRPL55-228ENST00000476267 VITQ6UXI7 678 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 APPL2Q8NEU8 664 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 KCNG4Q8TDN1 519 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 RUBCNQ92622 972 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 RMDN1Q96DB5 314 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 BORCS6Q96GS4 357 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 NELL2Q99435 816 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 CRISPLD1Q9H336 500 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 TRPV4Q9HBA0 871 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 TRPV5Q9NQA5 729 aa14.3□□□□□ -0.12
MRPL55-228ENST00000476267 SPATA6Q9NWH7 488 aaPredicted RBP14.3□□□□□ -0.12
MRPL55-228ENST00000476267 CACNA1IQ9P0X4 2223 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 VWA3AA6NCI4 1184 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 ARNTLO00327 626 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 ZNF197O14709 1029 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 SPTLC1O15269 473 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 LAMTOR5O43504 91 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 CD2BP2O95400 341 aaKnown RBP14.29□□□□□ -0.12
MRPL55-228ENST00000476267 CLTAP09496 248 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 TDGF1P13385 188 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 CYP3A5P20815 502 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 ZNF131P52739 623 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 SMTNP53814 917 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
MRPL55-228ENST00000476267 SPAG1Q07617 926 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 TWF1Q12792 350 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 GRM2Q14416 872 aa14.29□□□□□ -0.12
MRPL55-228ENST00000476267 ZNF852Q6ZMS4 543 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms