RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 RUBCNQ92622 972 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 GCDHQ92947 438 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ZBTB10Q96DT7 871 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 DMRTA2Q96SC8 542 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 BARD1Q99728 777 aaKnown RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 CENPOQ9BU64 300 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 SENP6Q9GZR1 1112 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 OSBPL5Q9H0X9 879 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 GCM1Q9NP62 436 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 ALG13Q9NP73 1137 aaKnown RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 LANCL2Q9NS86 450 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 PNPOQ9NVS9 261 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 IRAK4Q9NWZ3 460 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 GPRC5DQ9NZD1 345 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 CALCOCO1Q9P1Z2 691 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 TRPS1Q9UHF7 1281 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 FEZ2Q9UHY8 353 aaPredicted RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 GJD2Q9UKL4 321 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 USP19O94966 1318 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 MYBBP1AQ9BQG0 1328 aaKnown RBP4.87□□□□□ -1.63
VPS13D-207ENST00000476169 CARMIL2Q6F5E8 1435 aa4.87□□□□□ -1.63
VPS13D-207ENST00000476169 K7ENM7 598 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 TRIM38O00635 465 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 ADCY6O43306 1168 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 GPR32O75388 356 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 BAIAP3O94812 1187 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 GASTP01350 101 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 AMY1AP04745 511 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 THP07101 528 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 DDCP20711 480 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 MALP21145 153 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 RPL13P26373 211 aaKnown RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 EEF1GP26641 437 aaKnown RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 CRHR1P34998 444 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 TLE1Q04724 770 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 PRKG2Q13237 762 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 PLS1Q14651 629 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 ANKRD45Q5TZF3 282 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 FBXO38Q6PIJ6 1188 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 REXO1L1PQ8IX06 675 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 OR8H2Q8N162 312 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 GALNT15Q8N3T1 639 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 ZGPATQ8N5A5 531 aaKnown RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 ESX1Q8N693 406 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 FBXO15Q8NCQ5 510 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 IFI44Q8TCB0 444 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 FNIP1Q8TF40 1166 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 SIGLEC10Q96LC7 697 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 KIAA1683Q9H0B3 1180 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 OBP2BQ9NPH6 170 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 TMEM140Q9NV12 185 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 SPATA6Q9NWH7 488 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 ING3Q9NXR8 418 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 AJAP1Q9UKB5 411 aaPredicted RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 ITGB1BP2Q9UKP3 347 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 SLC39A10Q9ULF5 831 aa4.86□□□□□ -1.63
VPS13D-207ENST00000476169 RBM8AQ9Y5S9 174 aaKnown RBP4.86□□□□□ -1.63
VPS13D-207ENST00000476169 C2orf78A6NCI8 922 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 GOLGA6L3A6NEY3 463 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 LGALS16A8MUM7 142 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 F8W8V4 182 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 ITGA10O75578 1167 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 GFPT2O94808 682 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 PTPN7P35236 360 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 KIR2DL3P43628 341 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 ITGA8P53708 1063 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 RRADP55042 308 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SUMO3P55854 103 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 FMO1Q01740 532 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 DUSP2Q05923 314 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SNAPC2Q13487 334 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 CCDC30Q5VVM6 783 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 Q6ZUG5 572 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SESTD1Q86VW0 696 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 HEATR4Q86WZ0 1026 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 TMEFF1Q8IYR6 380 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 TRMT2AQ8IZ69 625 aaKnown RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 ZDHHC14Q8IZN3 488 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 FBXO18Q8NFZ0 1043 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SLC30A5Q8TAD4 765 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 KCNN1Q92952 543 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 LPPQ93052 612 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SLC7A6OSQ96CW6 309 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 ZC3H10Q96K80 434 aaKnown RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 NUDT16L1Q9BRJ7 211 aaKnown RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 CNPPD1Q9BV87 410 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 CARD11Q9BXL7 1154 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 WDCPQ9H6R7 721 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 BRD9Q9H8M2 597 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SARS2Q9NP81 518 aaKnown RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 UBN1Q9NPG3 1134 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 RIC8AQ9NPQ8 531 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 SACM1LQ9NTJ5 587 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 GJB4Q9NTQ9 266 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 TBC1D22BQ9NU19 505 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 CPNE7Q9UBL6 633 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 CTDP1Q9Y5B0 961 aaPredicted RBP4.85□□□□□ -1.63
VPS13D-207ENST00000476169 IRAK3Q9Y616 596 aa4.85□□□□□ -1.63
VPS13D-207ENST00000476169 ANKRD18BA2A2Z9 1011 aa4.84□□□□□ -1.63
VPS13D-207ENST00000476169 A6NLC8 198 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms