RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 GNGT1P63211 74 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 NOP14P78316 857 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 CENPCQ03188 943 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 MKRN4PQ13434 485 aaPredicted RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 MTMR3Q13615 1198 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 NCOA4Q13772 614 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 PREPLQ4J6C6 727 aaPredicted RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 CCDC137Q6PK04 289 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 PASD1Q8IV76 773 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 ANKRD13AQ8IZ07 590 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 LRRC71Q8N4P6 559 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 C1orf131Q8NDD1 294 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 TMBIM4Q9HC24 238 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 ZDHHC18Q9NUE0 388 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 RASAL2Q9UJF2 1139 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 AGTPBP1Q9UPW5 1226 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 GOLGA6L10A6NI86 522 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 SPDYE5A6NIY4 337 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 NOP56O00567 594 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 FSBPO95073 299 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 EFNA5P52803 228 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 ZNF844Q08AG5 666 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 LAMTOR4Q0VGL1 99 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 TTLL12Q14166 644 aaPredicted RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 SIX1Q15475 284 aaPredicted RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 CELF3Q5SZQ8 465 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 IER5Q5VY09 327 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 BCAS4Q8TDM0 211 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 FAM167AQ96KS9 214 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 MRPL4Q9BYD3 311 aaKnown RBP17.04■□□□□ 0.32
VARS2-207ENST00000476162 CENPHQ9H3R5 247 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 MTUS1Q9ULD2 1270 aa17.04■□□□□ 0.32
VARS2-207ENST00000476162 SIP14410 1827 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 PAPPA2Q9BXP8 1791 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 ZBTB42B2RXF5 422 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 MYO1FO00160 1098 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 FAM189A1O60320 539 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 TOM1L1O75674 476 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 CST3P01034 146 aaPredicted RBP17.03■□□□□ 0.32
VARS2-207ENST00000476162 MYZAPP0CAP1 466 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 MYBL1P10243 752 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 GNA15P30679 374 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 DRG2P55039 364 aaKnown RBP17.03■□□□□ 0.32
VARS2-207ENST00000476162 PLTPP55058 493 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 CYP1B1Q16678 543 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 MON1BQ7L1V2 547 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 BRSK2Q8IWQ3 736 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 ABRAQ8N0Z2 381 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 RNF149Q8NC42 400 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 RBBP8NLQ8NC74 664 aaPredicted RBP17.03■□□□□ 0.32
VARS2-207ENST00000476162 CCDC113Q9H0I3 377 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 CD248Q9HCU0 757 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 ATP8A1Q9Y2Q0 1164 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 GRIN2DO15399 1336 aa17.03■□□□□ 0.32
VARS2-207ENST00000476162 HMGB1P1B2RPK0 211 aaPredicted RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 TBXAS1P24557 533 aaPredicted RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 CALRP27797 417 aaKnown RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 FBXO16Q8IX29 292 aaPredicted RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 FBXO41Q8TF61 875 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 TRIM11Q96F44 468 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 MPHOSPH6Q99547 160 aaKnown RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 TXLNGYQ9BZA5 131 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 SBF1O95248 1867 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 EIF3HO15372 352 aaKnown RBP eCLIP17.02■□□□□ 0.321e-7■□□□□ 10.7
VARS2-207ENST00000476162 PPFIA2O75334 1257 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 LGR5O75473 907 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 NR1D1P20393 614 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 COILP38432 576 aaPredicted RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 KCNJ1P48048 391 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 NOMO3P69849 1222 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 PDCLQ13371 301 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 KCTD2Q14681 263 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 TMEM63BQ5T3F8 832 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 WDR78Q5VTH9 848 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 CDCA2Q69YH5 1023 aaPredicted RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 ZDHHC24Q6UX98 284 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 KDM7AQ6ZMT4 941 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 CCDC105Q8IYK2 499 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 FBXO25Q8TCJ0 367 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 TCP11Q8WWU5 503 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 N4BP2L2Q92802 583 aaPredicted RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 CDCA5Q96FF9 252 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 SPATA33Q96N06 139 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 MMP19Q99542 508 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 ACO2Q99798 780 aaKnown RBP17.02■□□□□ 0.32
VARS2-207ENST00000476162 C11orf70Q9BRQ4 267 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 GRHL1Q9NZI5 618 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 KCNH4Q9UQ05 1017 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 CNTN6Q9UQ52 1028 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 PTPN22Q9Y2R2 807 aa17.02■□□□□ 0.32
VARS2-207ENST00000476162 DNAJC25-GNG10A0A024R161 153 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 PODXLO00592 558 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 THAP12O43422 761 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 PRKCBP05771 671 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 RDXP35241 583 aaKnown RBP17.01■□□□□ 0.31
VARS2-207ENST00000476162 RPL21P46778 160 aaKnown RBP17.01■□□□□ 0.31
VARS2-207ENST00000476162 MOGSQ13724 837 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 MXD4Q14582 209 aaPredicted RBP17.01■□□□□ 0.31
VARS2-207ENST00000476162 MAPK6Q16659 721 aa17.01■□□□□ 0.31
VARS2-207ENST00000476162 WLSQ5T9L3 541 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms