RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 AAASQ9NRG9 546 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.36□□□□□ -1.23
UBR4-212ENST00000475973 TBC1D7Q9P0N9 293 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 RBPJLQ9UBG7 517 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 PRKAG3Q9UGI9 489 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 NOCTQ9UK39 431 aaKnown RBP7.36□□□□□ -1.23
UBR4-212ENST00000475973 GJD2Q9UKL4 321 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
UBR4-212ENST00000475973 UTP11Q9Y3A2 253 aaKnown RBP7.36□□□□□ -1.23
UBR4-212ENST00000475973 ALG6Q9Y672 507 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 ZSWIM8A7E2V4 1837 aa7.36□□□□□ -1.23
UBR4-212ENST00000475973 SYNGAP1Q96PV0 1343 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 GOLGA6L10A6NI86 522 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 SLC15A5A6NIM6 579 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 FOXN3O00409 490 aaPredicted RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 WDR46O15213 610 aaKnown RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 MSCO60682 206 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 RTN2O75298 545 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 NDUFB10O96000 172 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 SHBGP04278 402 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 CCNG1P51959 295 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 SLC18A1P54219 525 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 PMS2P54278 862 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 GTF2BQ00403 316 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 ADCY2Q08462 1091 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 BFSP1Q12934 665 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 AUHQ13825 339 aaKnown RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 COG2Q14746 738 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 SLMAPQ14BN4 828 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 RASA2Q15283 850 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 PRR16Q569H4 304 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 MAP3K21Q5TCX8 1036 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 CYB5D1Q6P9G0 228 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 THSD4Q6ZMP0 1018 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 SYDE1Q6ZW31 735 aaPredicted RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 TRMT10CQ7L0Y3 403 aaKnown RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 DAAM2Q86T65 1068 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 CACNA2D3Q8IZS8 1091 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 FBXO25Q8TCJ0 367 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 DDX1Q92499 740 aaKnown RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 SHC3Q92529 594 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 FBXL18Q96ME1 805 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 NACC1Q96RE7 527 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 PCDHB18PQ96TA0 734 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 RIT2Q99578 217 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 WNT8AQ9H1J5 351 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 EBF2Q9HAK2 575 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 PARVGQ9HBI0 331 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 SLC5A4Q9NY91 659 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 HOXC10Q9NYD6 342 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 TAS2R14Q9NYV8 317 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 WHRNQ9P202 907 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 WRAP73Q9P2S5 460 aaPredicted RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 PARP2Q9UGN5 583 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 LGALS13Q9UHV8 139 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 DBR1Q9UK59 544 aaKnown RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 TPX2Q9ULW0 747 aaKnown RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 MTMR7Q9Y216 660 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 MAFBQ9Y5Q3 323 aaPredicted RBP7.35□□□□□ -1.23
UBR4-212ENST00000475973 ACTL7BQ9Y614 415 aa7.35□□□□□ -1.23
UBR4-212ENST00000475973 NFASCO94856 1347 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CFAP73A6NFT4 308 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 MAGEB2O15479 319 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 DHX15O43143 795 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 RIPK2O43353 540 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 ATP9BO43861 1147 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 SNX3O60493 162 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CNMDO75829 334 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 GJB6O95452 261 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 SSBP05455 408 aaKnown RBP eCLIP7.34□□□□□ -1.23
UBR4-212ENST00000475973 CCNYL3P0C7X3 344 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 ERCC3P19447 782 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 NMT1P30419 496 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 CTHP32929 405 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 COPB2P35606 906 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 COILP38432 576 aaPredicted RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 SKIV2L2P42285 1042 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 RPL21P46778 160 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 GPC5P78333 572 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 ELF3P78545 371 aaPredicted RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 DR1Q01658 176 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 ARID5AQ03989 594 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 GRB14Q14449 540 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 HLTFQ14527 1009 aaKnown RBP eCLIP7.34□□□□□ -1.231e-6■□□□□ 8.3
UBR4-212ENST00000475973 CNGA2Q16280 664 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 SPDYAQ5MJ70 313 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 GKAP1Q5VSY0 366 aaPredicted RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 RGS9BPQ6ZS82 235 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CCDC121Q6ZUS5 278 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 INTS8Q75QN2 995 aaKnown RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 ASRGL1Q7L266 308 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 DPP9Q86TI2 863 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 EXOC3L1Q86VI1 746 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 DNAAF5Q86Y56 855 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 SLC13A5Q86YT5 568 aaPredicted RBP7.34□□□□□ -1.23
UBR4-212ENST00000475973 MAB21L3Q8N8X9 362 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 SHCBP1Q8NEM2 672 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 ARMC2Q8NEN0 867 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CFAP61Q8NHU2 1237 aa7.34□□□□□ -1.23
UBR4-212ENST00000475973 CYP2W1Q8TAV3 490 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms