RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 RMDN1Q96DB5 314 aa11.52□□□□□ -0.57
CALD1-217ENST00000475772 PRIMPOLQ96LW4 560 aa11.52□□□□□ -0.57
CALD1-217ENST00000475772 KCTD15Q96SI1 283 aaPredicted RBP11.52□□□□□ -0.57
CALD1-217ENST00000475772 TTPALQ9BTX7 342 aa11.52□□□□□ -0.57
CALD1-217ENST00000475772 DDX23Q9BUQ8 820 aaKnown RBP11.52□□□□□ -0.57
CALD1-217ENST00000475772 KLF16Q9BXK1 252 aaPredicted RBP11.52□□□□□ -0.57
CALD1-217ENST00000475772 CCDC113Q9H0I3 377 aa11.52□□□□□ -0.57
CALD1-217ENST00000475772 SEMA4AQ9H3S1 761 aa11.52□□□□□ -0.57
CALD1-217ENST00000475772 PRMT7Q9NVM4 692 aaPredicted RBP11.52□□□□□ -0.57
CALD1-217ENST00000475772 DNMT3BQ9UBC3 853 aaKnown RBP11.52□□□□□ -0.57
CALD1-217ENST00000475772 CDH7Q9ULB5 785 aa11.52□□□□□ -0.57
CALD1-217ENST00000475772 SHISA7A6NL88 538 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 ACKR2O00590 384 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 NEMFO60524 1076 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 RECQL4O94761 1208 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 C8AP07357 584 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 ATP2B1P20020 1258 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 SNW1Q13573 536 aaKnown RBP11.51□□□□□ -0.57
CALD1-217ENST00000475772 RAB33AQ14088 237 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 PSMD5Q16401 504 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 ECM1Q16610 540 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 NT5DC1Q5TFE4 455 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 SUMF1Q8NBK3 374 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 PJA1Q8NG27 643 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 WASF1Q92558 559 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 GTF3C6Q969F1 213 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 PLA2G2FQ9BZM2 168 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 HCFC1R1Q9NWW0 138 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 ZFP37Q9Y6Q3 630 aaPredicted RBP11.51□□□□□ -0.57
CALD1-217ENST00000475772 SPTBN2O15020 2390 aa11.51□□□□□ -0.57
CALD1-217ENST00000475772 SF3B1O75533 1304 aaKnown RBP eCLIP11.51□□□□□ -0.57
CALD1-217ENST00000475772 CITO14578 2027 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 N4BP3O15049 544 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 ST8SIA5O15466 376 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 HNRNPA1P09651 372 aaKnown RBP eCLIP11.5□□□□□ -0.57
CALD1-217ENST00000475772 CYP11B2P19099 503 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 FGFR3P22607 806 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 HOXA9P31269 272 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 OR1D2P34982 312 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 CREMQ03060 361 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 FZD5Q13467 585 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 SLC44A4Q53GD3 710 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 PPM1LQ5SGD2 360 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 AXDND1Q5T1B0 1012 aaPredicted RBP11.5□□□□□ -0.57
CALD1-217ENST00000475772 KIAA2013Q8IYS2 634 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 KCNG4Q8TDN1 519 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 PPP1R10Q96QC0 940 aaKnown RBP11.5□□□□□ -0.57
CALD1-217ENST00000475772 NACC1Q96RE7 527 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 POLR3CQ9BUI4 534 aaPredicted RBP11.5□□□□□ -0.57
CALD1-217ENST00000475772 TUFT1Q9NNX1 390 aa11.5□□□□□ -0.57
CALD1-217ENST00000475772 KANSL1LA0AUZ9 987 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 MED19A0JLT2 244 aaPredicted RBP11.49□□□□□ -0.57
CALD1-217ENST00000475772 TMEM189-UBE2V1I3L0A0 370 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 AXIN1O15169 862 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 PRKCBP05771 671 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 POU2F2P09086 479 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 CD72P21854 359 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 RPA1P27694 616 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 MCM7P33993 719 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 BRCC3P46736 316 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 CLCNKBP51801 687 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 SOX4Q06945 474 aaPredicted RBP11.49□□□□□ -0.57
CALD1-217ENST00000475772 PRPF4BQ13523 1007 aaKnown RBP11.49□□□□□ -0.57
CALD1-217ENST00000475772 UVSSAQ2YD98 709 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 GLRA4Q5JXX5 417 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 ALKAL1Q6UXT8 129 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.49□□□□□ -0.57
CALD1-217ENST00000475772 ZBTB8OSQ8IWT0 167 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 C4orf32Q8N8J7 132 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 CEP120Q8N960 986 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 MCPH1Q8NEM0 835 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 SLC7A14Q8TBB6 771 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 KIFC3Q9BVG8 833 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 C2orf40Q9H1Z8 148 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 GOLGA2P5Q9HBQ8 144 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 BRMS1Q9HCU9 246 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 MTRRQ9UBK8 725 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 GDAQ9Y2T3 454 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 PCDHB9Q9Y5E1 797 aa11.49□□□□□ -0.57
CALD1-217ENST00000475772 TPRP12270 2363 aaKnown RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 NCOR2Q9Y618 2525 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 ESPNB1AK53 854 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 MEFVO15553 781 aaPredicted RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 TBC1D4O60343 1298 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 RFX1P22670 979 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 TKTP29401 623 aaKnown RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 NAMPTP43490 491 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 RBM25P49756 843 aaKnown RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 MCCD1P59942 119 aaPredicted RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 ANAPC15P60006 121 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 GUCY1B3Q02153 619 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 ELAVL2Q12926 359 aaKnown RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 ANKRD1Q15327 319 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 ZNF174Q15697 407 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 MLF2Q15773 248 aaPredicted RBP11.48□□□□□ -0.57
CALD1-217ENST00000475772 MAPK6Q16659 721 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 UPP1Q16831 310 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 SLC5A9Q2M3M2 681 aa11.48□□□□□ -0.57
CALD1-217ENST00000475772 XKR4Q5GH76 650 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms