RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 MCM4P33991 863 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 RPS9P46781 194 aaKnown RBP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 TOB1P50616 345 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 MAPK7Q13164 816 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 MRPL58Q14197 206 aaKnown RBP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 GRM2Q14416 872 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 PUM1Q14671 1186 aaKnown RBP eCLIP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 CTXN3Q4LDR2 81 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 FAM78AQ5JUQ0 283 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 KRT79Q5XKE5 535 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 TPGS2Q68CL5 300 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 RINT1Q6NUQ1 792 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 MPZL3Q6UWV2 235 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 C1orf186Q6ZWK4 172 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 PDZD4Q76G19 769 aaPredicted RBP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 TCEAL8Q8IYN2 117 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 DNASE1L2Q92874 299 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 BORCS6Q96GS4 357 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 ZFP14Q9HCL3 533 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 ZSCAN32Q9NX65 697 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 MRPS17Q9Y2R5 130 aaKnown RBP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 RBM19Q9Y4C8 960 aaKnown RBP13.58□□□□□ -0.24
CCDC57-208ENST00000475635 PCDHB6Q9Y5E3 794 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 CACNA1BQ00975 2339 aa13.58□□□□□ -0.24
CCDC57-208ENST00000475635 SHISA7A6NL88 538 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 SFI1A8K8P3 1242 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 NRG2O14511 850 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-208ENST00000475635 U2AF2P26368 475 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC57-208ENST00000475635 CCR2P41597 374 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 ADCY1Q08828 1119 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 FZD5Q13467 585 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 NOLC1Q14978 699 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC57-208ENST00000475635 IL17AQ16552 155 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 TSSK4Q6SA08 328 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 KCNK18Q7Z418 384 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 ELMOD1Q8N336 334 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 ZBTB44Q8NCP5 570 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 DDX12PQ92771 950 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 ZBTB45Q96K62 511 aaPredicted RBP13.57□□□□□ -0.24
CCDC57-208ENST00000475635 SUSD3Q96L08 255 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 TBC1D32Q96NH3 1257 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 TRMT61BQ9BVS5 477 aaKnown RBP13.57□□□□□ -0.24
CCDC57-208ENST00000475635 BRD9Q9H8M2 597 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 C17orf75Q9HAS0 396 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 ANKFY1Q9P2R3 1169 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
CCDC57-208ENST00000475635 MICAL2O94851 1124 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 TWF1Q12792 350 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 STRN3Q13033 797 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 MTAPQ13126 283 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 ZRSR1Q15695 479 aaKnown RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 SLC10A6Q3KNW5 377 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 SEZ6Q53EL9 994 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 IQCEQ6IPM2 695 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 ZNF280DQ6N043 979 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 APPL2Q8NEU8 664 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 NELL1Q92832 810 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 ZSCAN31Q96LW9 406 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 ZSWIM3Q96MP5 696 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 ASB16Q96NS5 453 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 MMTAG2Q9BU76 263 aaKnown RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 PRMT8Q9NR22 394 aaPredicted RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 PPP4R2Q9NY27 417 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 DLL3Q9NYJ7 618 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 CEP72Q9P209 647 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 TUBGCP4Q9UGJ1 667 aa13.56□□□□□ -0.24
CCDC57-208ENST00000475635 AFF4Q9UHB7 1163 aaKnown RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 NDRG2Q9UN36 371 aaKnown RBP13.56□□□□□ -0.24
CCDC57-208ENST00000475635 LAD1O00515 517 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 MAN2B1O00754 1011 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 LILRB5O75023 590 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 TOM1L1O75674 476 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 CPB1P15086 417 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 PSMC3P17980 439 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 GUCY2CP25092 1073 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 PRPHP41219 470 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 RAD51AP2Q09MP3 1159 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 RSPO4Q2I0M5 234 aaPredicted RBP13.55□□□□□ -0.24
CCDC57-208ENST00000475635 VITQ6UXI7 678 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 DTHD1Q6ZMT9 781 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 SMARCD2Q92925 531 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 IRF7Q92985 503 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 SECISBP2LQ93073 1101 aaKnown RBP13.55□□□□□ -0.24
CCDC57-208ENST00000475635 NTPCRQ9BSD7 190 aaKnown RBP13.55□□□□□ -0.24
CCDC57-208ENST00000475635 TIPINQ9BVW5 301 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 EPC1Q9H2F5 836 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 SH2B1Q9NRF2 756 aaPredicted RBP13.55□□□□□ -0.24
CCDC57-208ENST00000475635 MAFFQ9ULX9 164 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 PCDHB8Q9UN66 801 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 SMG5Q9UPR3 1016 aaKnown RBP13.55□□□□□ -0.24
CCDC57-208ENST00000475635 OBSL1O75147 1896 aa13.55□□□□□ -0.24
CCDC57-208ENST00000475635 MOSPD3O75425 235 aa13.54□□□□□ -0.24
CCDC57-208ENST00000475635 CXCL8P10145 99 aa13.54□□□□□ -0.24
CCDC57-208ENST00000475635 MAPTP10636 758 aaKnown RBP13.54□□□□□ -0.24
CCDC57-208ENST00000475635 MYL4P12829 197 aa13.54□□□□□ -0.24
CCDC57-208ENST00000475635 PLS3P13797 630 aa13.54□□□□□ -0.24
CCDC57-208ENST00000475635 GJA1P17302 382 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms