RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 OAZ2O95190 189 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CLTAP09496 248 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 OR4Q2P0C623 313 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CEBPBP17676 345 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 PLCG1P19174 1290 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CD72P21854 359 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 FCARP24071 287 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 LRPAP1P30533 357 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 DDIT3P35638 169 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 AARSP49588 968 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 SMTNP53814 917 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 ADCY1Q08828 1119 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 STRN3Q13033 797 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CUL4AQ13619 759 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 DHX8Q14562 1220 aaKnown RBP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 MCM6Q14566 821 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 NOLC1Q14978 699 aaKnown RBP eCLIP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 PTPAQ15257 358 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 SF3A1Q15459 793 aaKnown RBP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 ENOX2Q16206 610 aaKnown RBP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CTXN3Q4LDR2 81 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 SLC44A4Q53GD3 710 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 TANGO2Q6ICL3 276 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 RNF19BQ6ZMZ0 732 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 APBB1IPQ7Z5R6 666 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 GPBP1Q86WP2 473 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 HS6ST3Q8IZP7 471 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 EPSTI1Q96J88 318 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 AK8Q96MA6 479 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 PLEKHA5Q9HAU0 1116 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CYP4F11Q9HBI6 524 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 AVENQ9NQS1 362 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 SMC3Q9UQE7 1217 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 MRPS23Q9Y3D9 190 aaKnown RBP7.66□□□□□ -1.18
HDAC3-207ENST00000475549 SIT1Q9Y3P8 196 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 NUB1Q9Y5A7 615 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 INSL5Q9Y5Q6 135 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 CLIC4Q9Y696 253 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 COL4A3Q01955 1670 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 PLXNA3P51805 1871 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 DENND4AQ7Z401 1863 aa7.66□□□□□ -1.18
HDAC3-207ENST00000475549 ANKRD63C9JTQ0 380 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 TRAK2O60296 914 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 PIGRP01833 764 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 GJA1P17302 382 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 PTPN2P17706 415 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 CYP3A5P20815 502 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 NMT1P30419 496 aaKnown RBP7.65□□□□□ -1.18
HDAC3-207ENST00000475549 ADSSP30520 456 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 MCM4P33991 863 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 UBA7P41226 1012 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 MCM2P49736 904 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 GTF2BQ00403 316 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 PLCB2Q00722 1185 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 KCNA1Q09470 495 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 DNAH14Q0VDD8 3507 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 ZC2HC1CQ53FD0 456 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-207ENST00000475549 FAM78AQ5JUQ0 283 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 TPGS2Q68CL5 300 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 SCARA3Q6AZY7 606 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 FAM173BQ6P4H8 233 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 C1orf210Q8IVY1 113 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 ZNF687Q8N1G0 1237 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 MYCT1Q8N699 235 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 BEST2Q8NFU1 509 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 PJA1Q8NG27 643 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 SPOCK2Q92563 424 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 RAD54LQ92698 747 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 KIF12Q96FN5 646 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 CORO1BQ9BR76 489 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 STRA6Q9BX79 667 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 LRRC3Q9BY71 257 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 DNAJC25Q9H1X3 360 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 GDE1Q9NZC3 331 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 LARSQ9P2J5 1176 aaKnown RBP7.65□□□□□ -1.18
HDAC3-207ENST00000475549 KCNG1Q9UIX4 513 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 CPSF3Q9UKF6 684 aaKnown RBP7.65□□□□□ -1.18
HDAC3-207ENST00000475549 ODF2LQ9ULJ1 636 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 PCDHB8Q9UN66 801 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 KIF3AQ9Y496 699 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 R4GN57 208 aa7.65□□□□□ -1.18
HDAC3-207ENST00000475549 C2orf16Q68DN1 1984 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 NCANO14594 1321 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 KANSL1LA0AUZ9 987 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 H7C4K7 107 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 PIRO00625 290 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 PRRG1O14668 218 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 HNRNPDLO14979 420 aaKnown RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 SLC26A4O43511 780 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ECI2O75521 394 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 MICAL2O94851 1124 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 CENPBP07199 599 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 NFICP08651 508 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 SP9P0CG40 484 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 MARCKSP29966 332 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 LONP1P36776 959 aaKnown RBP7.64□□□□□ -1.19
HDAC3-207ENST00000475549 VIPR2P41587 438 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 ACOT2P49753 483 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 LIG4P49917 911 aa7.64□□□□□ -1.19
HDAC3-207ENST00000475549 CDR1P51861 262 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms