RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 FNBP1Q96RU3 617 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 TTC1Q99614 292 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 SMAD5Q99717 465 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 APBA2Q99767 749 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 HAUS8Q9BT25 410 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 FAM167BQ9BTA0 163 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 SPZ1Q9BXG8 430 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 CLSTN2Q9H4D0 955 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 ANKZF1Q9H8Y5 726 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 PIDD1Q9HB75 910 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 FAIMQ9NVQ4 179 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 AIPL1Q9NZN9 384 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 CTTNBP2NLQ9P2B4 639 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 APEX2Q9UBZ4 518 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 HPCAL4Q9UM19 191 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 EXOC7Q9UPT5 735 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 CHMP2BQ9UQN3 213 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 LRRC42Q9Y546 428 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 NUMBLQ9Y6R0 609 aa6.39□□□□□ -1.39
ECHDC1-215ENST00000475319 FAM135BQ49AJ0 1406 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TMEM2Q9UHN6 1383 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 NPHP3Q7Z494 1330 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TRIM64A6NGJ6 449 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TRIM64BA6NI03 449 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ADARB2-AS1A8MUL3 147 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 C9IYK1 514 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 FAM47E-STBD1D6RA91 191 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 YKT6O15498 198 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PRODHO43272 600 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 HNRNPRO43390 633 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 SULT1B1O43704 296 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 STRNO43815 780 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 FAM107AO95990 144 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PAHP00439 452 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ITGA2BP08514 1039 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PABPC1P11940 636 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ALAS1P13196 640 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 CPEP16870 476 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ANXA13P27216 316 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PPP2R1AP30153 589 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 HMOX2P30519 316 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 GBP1P32455 592 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 GRIA2P42262 883 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TMED10P49755 219 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TMF1P82094 1093 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 APBA1Q02410 837 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ITGB3BPQ13352 177 aaPredicted RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 NR1D2Q14995 579 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PPP1R7Q15435 360 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 FBLN7Q53RD9 439 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 SYCP2LQ5T4T6 812 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 DAB2IPQ5VWQ8 1189 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ANO7Q6IWH7 933 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TTC23LQ6PF05 361 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TRIM65Q6PJ69 517 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 CYP26C1Q6V0L0 522 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 RBM43Q6ZSC3 357 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 CACNA2D4Q7Z3S7 1137 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PPP1R42Q7Z4L9 355 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 OSTM1Q86WC4 334 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ZNF227Q86WZ6 799 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PHACTR4Q8IZ21 702 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 VPS52Q8N1B4 723 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PPM1KQ8N3J5 372 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 AADATQ8N5Z0 425 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 USP38Q8NB14 1042 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 BBOF1Q8ND07 529 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ATL1Q8WXF7 558 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 RUBCNQ92622 972 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 RPGRQ92834 1020 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TBC1D20Q96BZ9 403 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 IQCDQ96DY2 449 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 NRBF2Q96F24 287 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 CEP95Q96GE4 821 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 SAMD11Q96NU1 681 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 OLFM3Q96PB7 478 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 MOGAT1Q96PD6 335 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 MDFIQ99750 246 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 WNT10AQ9GZT5 417 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TRPV6Q9H1D0 765 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 NUP62CLQ9H1M0 184 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 XAB2Q9HCS7 855 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 CNGB3Q9NQW8 809 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 SAMSN1Q9NSI8 373 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ATP8A2Q9NTI2 1148 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 DDX19AQ9NUU7 478 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 SUCOQ9UBS9 1254 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TJP2Q9UDY2 1190 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 SEC63Q9UGP8 760 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 RASAL2Q9UJF2 1139 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 FBXL5Q9UKA1 691 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 ZBTB1Q9Y2K1 713 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 HIF3AQ9Y2N7 669 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 TRIM17Q9Y577 477 aa6.38□□□□□ -1.39
ECHDC1-215ENST00000475319 PLEKHG1Q9ULL1 1385 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CLRN2A0PK11 232 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 CCDC169A6NNP5 214 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 HNRNPCL2B2RXH8 293 aa6.37□□□□□ -1.39
ECHDC1-215ENST00000475319 KIF28PB7ZC32 967 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms