RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 L3MBTL3Q96JM7 780 aaPredicted RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 C20orf96Q9NUD7 363 aaPredicted RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 ADCY10Q96PN6 1610 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 CDC42BPAQ5VT25 1732 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 PDXKO00764 312 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 ANGPT2O15123 496 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 TCN1P20061 433 aaPredicted RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 USP10Q14694 798 aaKnown RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 SGMS1Q86VZ5 419 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 C4orf33Q8N1A6 199 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 IQCA1LA6NCM1 817 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 PGM1P36871 562 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 XKR3Q5GH77 459 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 IER5Q5VY09 327 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 IFNEQ86WN2 208 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 IGDCC4Q8TDY8 1250 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 TASP1Q9H6P5 420 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 PCMTD2Q9NV79 361 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 TRAF3IP3Q9Y228 551 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 AARS2Q5JTZ9 985 aaKnown RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 CDR2LQ86X02 465 aaPredicted RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 COG1Q8WTW3 980 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 C9orf72Q96LT7 481 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 MED15Q96RN5 788 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 ARHGEF38Q9NXL2 777 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 ARHGAP31Q2M1Z3 1444 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 CCDC22O60826 627 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 PRKCEQ02156 737 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 C3orf62Q6ZUJ4 267 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 SPATA18Q8TC71 538 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 ACSF2Q96CM8 615 aaPredicted RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 IL1RL2Q9HB29 575 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 KLK14Q9P0G3 267 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 MBD5Q9P267 1494 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 DGAT1O75907 488 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 TEDDM1Q5T9Z0 273 aa11.51□□□□□ -0.57
VAPB-204ENST00000475243 RBBP8NLQ8NC74 664 aaPredicted RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 ZC3H7BQ9UGR2 993 aaKnown RBP11.51□□□□□ -0.57
VAPB-204ENST00000475243 EEF2KO00418 725 aaKnown RBP11.5□□□□□ -0.57
VAPB-204ENST00000475243 PDHBP11177 359 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 PDIA5Q14554 519 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 KCNB1Q14721 858 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 IPMKQ8NFU5 416 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SH3TC2Q8TF17 1288 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 NEU2Q9Y3R4 380 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SUPT3HB4E1H0 165 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SUPT3HO75486 399 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 HIST1H2AGP0C0S8 130 aaPredicted RBP11.5□□□□□ -0.57
VAPB-204ENST00000475243 ITGA4P13612 1032 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 HIST1H2ADP20671 130 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 RCAN1P53805 252 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 HIST1H2AHQ96KK5 128 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 HIST1H2AJQ99878 128 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 H2AFJQ9BTM1 129 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 TMEM106CQ9BVX2 250 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 CD274Q9NZQ7 290 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SH3BP1Q9Y3L3 701 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 A0A1W2PQC6 194 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 UCHL3P15374 230 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 KRT4P19013 534 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SLC1A1P43005 524 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 CNGA3Q16281 694 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SLC18A3Q16572 532 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SHCBP1Q8NEM2 672 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SLC24A3Q9HC58 644 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 GGA3Q9NZ52 723 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 LSM7Q9UK45 103 aaKnown RBP11.5□□□□□ -0.57
VAPB-204ENST00000475243 PCDHB7Q9Y5E2 793 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 MYO1GB0I1T2 1018 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 PSMD14O00487 310 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SNAPC2Q13487 334 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SEZ6Q53EL9 994 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SCFD1Q8WVM8 642 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 FOPNLQ96NB1 174 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 RBM15Q96T37 977 aaKnown RBP eCLIP11.5□□□□□ -0.57
VAPB-204ENST00000475243 CHMP2BQ9UQN3 213 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 MYO1CO00159 1063 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 NCAM1P13591 858 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SLC9A1P19634 815 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 RAP1GDS1P52306 607 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 PMS1P54277 932 aaKnown RBP11.5□□□□□ -0.57
VAPB-204ENST00000475243 EMC2Q15006 297 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 ATF7IP2Q5U623 682 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 ANKS3Q6ZW76 656 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SNX31Q8N9S9 440 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 OR9Q1Q8NGQ5 310 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 CYFIP2Q96F07 1278 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 AGBL1Q96MI9 1066 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 SNX12Q9UMY4 172 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 ZNF609O15014 1411 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 GH1P01241 217 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 FDX1P10109 184 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 VSNL1P62760 191 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 PIGHQ14442 188 aaPredicted RBP11.5□□□□□ -0.57
VAPB-204ENST00000475243 HIC1Q14526 733 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 GJB7Q6PEY0 223 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 C11orf74Q86VG3 221 aa11.5□□□□□ -0.57
VAPB-204ENST00000475243 ARHGEF26Q96DR7 871 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms