RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 MARK3P27448 753 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 POLD1P28340 1107 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 MAGEA1P43355 309 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 PHKA2P46019 1235 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 DHX9Q08211 1270 aaKnown RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 HSPA14Q0VDF9 509 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 CBX3Q13185 183 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ADGRD1Q6QNK2 874 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 RAPH1Q70E73 1250 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 MAVSQ7Z434 540 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 C2CD5Q86YS7 1000 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 TREML1Q86YW5 311 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ERI1Q8IV48 349 aaKnown RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 LCORLQ8N3X6 602 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 KIF2BQ8N4N8 673 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 FBLIM1Q8WUP2 373 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 CPLX3Q8WVH0 158 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 IFT81Q8WYA0 676 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ARHGEF26Q96DR7 871 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 DCAF5Q96JK2 942 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 OLFM3Q96PB7 478 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 CTRCQ99895 268 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 PAIP2Q9BPZ3 127 aaKnown RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 ZSWIM1Q9BR11 485 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 RTFDC1Q9BY42 306 aaPredicted RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 GPCPD1Q9NPB8 672 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 WASF2Q9Y6W5 498 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 PASKQ96RG2 1323 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 H0Y858 1186 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 BMP10O95393 424 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 FTCDO95954 541 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 VIL1P09327 827 aaKnown RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 ATXN8OSP0DMR3 200 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 CALM1P0DP23 149 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 CALM2P0DP24 149 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 CALM3P0DP25 149 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ZNF26P17031 533 aaPredicted RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 DCKP27707 260 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 GBP2P32456 591 aaPredicted RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 TCF7P36402 384 aaPredicted RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 CDK9P50750 372 aaKnown RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 GPX6P59796 221 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 EVX2Q03828 476 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 TLR1Q15399 786 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 Q4G0T1 1027 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 KDM4DQ6B0I6 523 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 SPOPLQ6IQ16 392 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 C17orf50Q8WW18 174 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 RFFLQ8WZ73 363 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 DHRS1Q96LJ7 313 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ZNF597Q96LX8 424 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 SLC26A6Q9BXS9 759 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 GBA3Q9H227 469 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 EBF3Q9H4W6 596 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 TLR9Q9NR96 1032 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 DMTF1Q9Y222 760 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ATP8A1Q9Y2Q0 1164 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 ZBTB12Q9Y330 459 aaPredicted RBP4.37□□□□□ -1.71
USP16-205ENST00000474835 UBE4BO95155 1302 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 TNKSO95271 1327 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 THSD7BQ9C0I4 1608 aa4.37□□□□□ -1.71
USP16-205ENST00000474835 PP2D1A8MPX8 630 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 E5RJQ4 531 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 TGFB1I1O43294 461 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 CREB3O43889 395 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 CPNE6O95741 557 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 UCHL3P15374 230 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 COILP38432 576 aaPredicted RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 RAD23BP54727 409 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 RASGRF1Q13972 1273 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 SLC1A5Q15758 541 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 VPS72Q15906 364 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 ZNF484Q5JVG2 852 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 NUP210LQ5VU65 1888 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 BTBD8Q5XKL5 378 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 PLA2G4FQ68DD2 849 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 USP51Q70EK9 711 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 CEP57Q86XR8 500 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 ZCCHC9Q8N567 271 aaKnown RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 TTC9Q92623 222 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 DDX27Q96GQ7 796 aaKnown RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 CCDC42Q96M95 316 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 C7orf26Q96N11 449 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 TTC25Q96NG3 672 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 MYL10Q9BUA6 226 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 DDX23Q9BUQ8 820 aaKnown RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 VPS11Q9H270 941 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 FAM207AQ9NSI2 230 aaPredicted RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 CCDC87Q9NVE4 849 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 TUBA8Q9NY65 449 aaPredicted RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 DLGAP2Q9P1A6 1054 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 BAIAP2L1Q9UHR4 511 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 STRIP2Q9ULQ0 834 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 PPM1HQ9ULR3 514 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 PACSIN2Q9UNF0 486 aaPredicted RBP4.36□□□□□ -1.71
USP16-205ENST00000474835 SCN8AQ9UQD0 1980 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 HMX2A2RU54 273 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 A6NJR5 290 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 UGT2B4P06133 528 aa4.36□□□□□ -1.71
USP16-205ENST00000474835 FAM200BP0CF97 657 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms