RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 GOLGA2P5Q9HBQ8 144 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 SLC38A7Q9NVC3 462 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 RAB20Q9NX57 234 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 HCSTQ9UBK5 93 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 CACNG4Q9UBN1 327 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 AGAP1Q9UPQ3 857 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 SIK3Q9Y2K2 1263 aa10.8□□□□□ -0.68
COL8A1-206ENST00000474648 XPOTO43592 962 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 PHACTR2O75167 634 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 ITGB3P05106 788 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 TPM2P07951 284 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 ATP2A2P16615 1042 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 SLC9A1P19634 815 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 PON1P27169 355 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 POLR2BP30876 1174 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 RPL9P32969 192 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 BMP8BP34820 402 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 KLK7P49862 253 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 CLCNKBP51801 687 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 MYL6P60660 151 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 RBP5P82980 135 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 MYL7Q01449 175 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 APBA1Q02410 837 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 TUSC3Q13454 348 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 BIRC3Q13489 604 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 NCOA4Q13772 614 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 SYCP1Q15431 976 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 UPP1Q16831 310 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 PAN2Q504Q3 1202 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 FKBP15Q5T1M5 1219 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 FAM109BQ6ICB4 259 aaPredicted RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 GBP6Q6ZN66 633 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 ABI1Q8IZP0 508 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 RABGGTAQ92696 567 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 ELMO3Q96BJ8 720 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 ERGIC2Q96RQ1 377 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 SLC9A7Q96T83 725 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 RAD9AQ99638 391 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 PAAF1Q9BRP4 392 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 UBE2OQ9C0C9 1292 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 INTS2Q9H0H0 1204 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 XYLT2Q9H1B5 865 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 PRO3102Q9H379 93 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 APOBEC3GQ9HC16 384 aaKnown RBP10.79□□□□□ -0.68
COL8A1-206ENST00000474648 SIX2Q9NPC8 291 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 DNAJB4Q9UDY4 337 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 ITGA11Q9UKX5 1188 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 COL4A6Q14031 1691 aa10.79□□□□□ -0.68
COL8A1-206ENST00000474648 A0A1W2PQC6 194 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 CASTOR2A6NHX0 329 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 GRXCR1A8MXD5 290 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 SPTLC1O15269 473 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 CBFA2T2O43439 604 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 NOL4O94818 638 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 ADCY5O95622 1261 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 STAU1O95793 577 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 LINC00271P0C7V0 271 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 MRE11P49959 708 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 TRPC3Q13507 836 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 EXOC3L4Q17RC7 722 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 SGSM1Q2NKQ1 1148 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 DCLRE1AQ6PJP8 1040 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 CMTR2Q8IYT2 770 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 FBXL13Q8NEE6 735 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 TATDN2Q93075 761 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 DDX27Q96GQ7 796 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 MRFAP1L1Q96HT8 127 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 RNPC3Q96LT9 517 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 PI4K2AQ9BTU6 479 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 MRPL9Q9BYD2 267 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 TRIM5Q9C035 493 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 MTIF3Q9H2K0 278 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 VRTNQ9H8Y1 702 aa10.78□□□□□ -0.68
COL8A1-206ENST00000474648 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 MRPL42Q9Y6G3 142 aaKnown RBP10.78□□□□□ -0.68
COL8A1-206ENST00000474648 F8W810 466 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 PODXLO00592 558 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 EPHB6O15197 1021 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 ASS1P00966 412 aaKnown RBP10.77□□□□□ -0.69
COL8A1-206ENST00000474648 ALDH2P05091 517 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 GALTP07902 379 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 KRT19P08727 400 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 ATICP31939 592 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 SLC11A1P49279 550 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 RABGGTBP53611 331 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 LILRA4P59901 499 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 RNASELQ05823 741 aaKnown RBP10.77□□□□□ -0.69
COL8A1-206ENST00000474648 CETN1Q12798 172 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 LRMPQ12912 555 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 BTG3Q14201 252 aaPredicted RBP10.77□□□□□ -0.69
COL8A1-206ENST00000474648 KLHDC7AQ5VTJ3 777 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 SPOPLQ6IQ16 392 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 PHLDB3Q6NSJ2 640 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 TRIM65Q6PJ69 517 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 VSTM4Q8IW00 320 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 ARHGEF19Q8IW93 802 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 LRRC43Q8N309 656 aa10.77□□□□□ -0.69
COL8A1-206ENST00000474648 LRRC52Q8N7C0 313 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms