RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 STK17AQ9UEE5 414 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 FBXL5Q9UKA1 691 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 CLIC4Q9Y696 253 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 NOTCH4Q99466 2003 aa22.16■■□□□ 1.14
PDLIM4-206ENST00000474421 A0A0B4J269 797 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 SYT1P21579 422 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 ARPP19P56211 112 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 GTF2BQ00403 316 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 PTPAQ15257 358 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 ZBTB6Q15916 424 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 ITFG1Q8TB96 612 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 MSTO1Q9BUK6 570 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 CYP4F11Q9HBI6 524 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 HCFC1R1Q9NWW0 138 aa22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 MRPS23Q9Y3D9 190 aaKnown RBP22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 SRPRBQ9Y5M8 271 aaKnown RBP22.15■■□□□ 1.14
PDLIM4-206ENST00000474421 MYH15Q9Y2K3 1946 aa22.14■■□□□ 1.14
PDLIM4-206ENST00000474421 KRBA1A5PL33 1030 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 LACTBL1A8MY62 500 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 M0QZQ0 153 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 PTPN2P17706 415 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 PAX3P23760 479 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 TNFSF9P41273 254 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 ENOX2Q16206 610 aaKnown RBP22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 PARM1Q6UWI2 310 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 MAP4K3Q8IVH8 894 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 GPR152Q8TDT2 470 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 EPSTI1Q96J88 318 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 ST6GALNAC4Q9H4F1 302 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 ARHGEF3Q9NR81 526 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 FAM86C1Q9NVL1 165 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 GDE1Q9NZC3 331 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 CA14Q9ULX7 337 aa22.14■■□□□ 1.13
PDLIM4-206ENST00000474421 FAM189A1O60320 539 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 ADRB2P07550 413 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 RHOP08100 348 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 YWHAHQ04917 246 aaPredicted RBP22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 SPAG1Q07617 926 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 RESTQ13127 1097 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 SLFN12LQ6IEE8 588 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 PHLDB3Q6NSJ2 640 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 NPAS3Q8IXF0 933 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 CCDC105Q8IYK2 499 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 ELMOD1Q8N336 334 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 FGF14Q92915 247 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 FIZ1Q96SL8 496 aa22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 AFF4Q9UHB7 1163 aaKnown RBP22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 FBXO2Q9UK22 296 aaPredicted RBP22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 MORC2Q9Y6X9 1032 aaPredicted RBP22.13■■□□□ 1.13
PDLIM4-206ENST00000474421 PI15O43692 258 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 OAZ2O95190 189 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 NMT1P30419 496 aaKnown RBP22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 SPECC1Q5M775 1068 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 RRAGBQ5VZM2 374 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 USP37Q86T82 979 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 DTWD2Q8NBA8 298 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 BEST2Q8NFU1 509 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 HVCN1Q96D96 273 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 SHDQ96IW2 340 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 BACH2Q9BYV9 841 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 ZSCAN16Q9H4T2 348 aaPredicted RBP22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 TBC1D17Q9HA65 648 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 SEL1LQ9UBV2 794 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 CPSF3Q9UKF6 684 aaKnown RBP22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 DERAQ9Y315 318 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 INSL5Q9Y5Q6 135 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 USP34Q70CQ2 3546 aa22.12■■□□□ 1.13
PDLIM4-206ENST00000474421 PROB1E7EW31 1015 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 ZNF197O14709 1029 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 CPB1P15086 417 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 AARSP49588 968 aaKnown RBP eCLIP22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 PFKPQ01813 784 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 POU5F1Q01860 360 aaKnown RBP22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 ZBTB41Q5SVQ8 909 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 SPATA1Q5VX52 437 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 SLC39A4Q6P5W5 647 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 DSTYKQ6XUX3 929 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 CCDC73Q6ZRK6 1079 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 USP49Q70CQ1 688 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 SV2BQ7L1I2 683 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 FAM212AQ96EL1 285 aa22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 RPP25Q9BUL9 199 aaKnown RBP22.11■■□□□ 1.13
PDLIM4-206ENST00000474421 MICAL2O94851 1124 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 SEC24AO95486 1093 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 GAP43P17677 238 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 GPC5P78333 572 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 ADCY1Q08828 1119 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 ADALQ6DHV7 355 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 IQCEQ6IPM2 695 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 ZNF720Q7Z2F6 126 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 LEMD2Q8NC56 503 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 ING5Q8WYH8 240 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 CORO1BQ9BR76 489 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 ASB7Q9H672 318 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 STYXL1Q9Y6J8 313 aa22.1■■□□□ 1.13
PDLIM4-206ENST00000474421 OR6C75A6NL08 312 aa22.09■■□□□ 1.13
PDLIM4-206ENST00000474421 GFRA3O60609 400 aa22.09■■□□□ 1.13
PDLIM4-206ENST00000474421 ECI2O75521 394 aa22.09■■□□□ 1.13
PDLIM4-206ENST00000474421 TYMPP19971 482 aa22.09■■□□□ 1.13
PDLIM4-206ENST00000474421 NBL1P41271 181 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms