RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, humanhuman

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-208ENST00000474272 SEPT2Q15019 361 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 SF3B3Q15393 1217 aaKnown RBP4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 CNTD1Q8N815 330 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 CCHCR1Q8TD31 782 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 SSH3Q8TE77 659 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 DDB2Q92466 427 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 FATE1Q969F0 183 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 MTMR8Q96EF0 704 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 ACE2Q9BYF1 805 aaPredicted RBP4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 GREM2Q9H772 168 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 LANCL2Q9NS86 450 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 RBM12Q9NTZ6 932 aaKnown RBP4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 MOCS1Q9NZB8 636 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 SLC17A6Q9P2U8 582 aa4.83□□□□□ -1.64
TMEM50B-208ENST00000474272 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 ULK1O75385 1050 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 SLC6A9P48067 706 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 KRTAP10-9P60411 292 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 MRPS9P82933 396 aaKnown RBP4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 SRSF2Q01130 221 aaKnown RBP4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 MUM1L1Q5H9M0 696 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 OTUD7BQ6GQQ9 843 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 ZNF788Q6ZQV5 615 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 TSHZ1Q6ZSZ6 1077 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 KCNK18Q7Z418 384 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 LNX2Q8N448 690 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 SCARB1Q8WTV0 552 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 LMBR1Q8WVP7 490 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 ZNF778Q96MU6 729 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 ASPSCR1Q9BZE9 553 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 PUS7LQ9H0K6 701 aaKnown RBP4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 CCDC8Q9H0W5 538 aaPredicted RBP4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 CPNE5Q9HCH3 593 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 ARPP21Q9UBL0 812 aaPredicted RBP4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 DMTF1Q9Y222 760 aa4.82□□□□□ -1.64
TMEM50B-208ENST00000474272 K7ESF4 209 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 PEX1O43933 1283 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 ERVK-21P61565 698 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 EXOSC10Q01780 885 aaKnown RBP4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 ZGPATQ8N5A5 531 aaKnown RBP4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 OR2I1PQ8NGU4 316 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 TBC1D15Q8TC07 691 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 SMG7Q92540 1137 aaKnown RBP4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 KLHL42Q9P2K6 505 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 TRHDEQ9UKU6 1024 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 PCDHGA2Q9Y5H1 932 aa4.81□□□□□ -1.64
TMEM50B-208ENST00000474272 TRGV11A0A075B6L2 103 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 WDR91A4D1P6 747 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 GABRDO14764 452 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 KIAA0391O15091 583 aaKnown RBP4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 YY2O15391 372 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 AMY1AP04745 511 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 ELFN1P0C7U0 828 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 OSMP13725 252 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 MCAMP43121 646 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 ZNF81P51508 661 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 ITKQ08881 620 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 SLFN5Q08AF3 891 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 FAM180AQ6UWF9 173 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 SEM1Q6ZVN7 128 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 COLGALT2Q8IYK4 626 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 CBARPQ8N350 705 aaPredicted RBP4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 Q8NA96 180 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 TFAP2BQ92481 460 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 ANKS1AQ92625 1134 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 SLC2A13Q96QE2 648 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 SMAD5Q99717 465 aaKnown RBP4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 HEPHQ9BQS7 1158 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 ADI1Q9BV57 179 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 TMEM140Q9NV12 185 aa4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 VSX1Q9NZR4 365 aaPredicted RBP4.8□□□□□ -1.64
TMEM50B-208ENST00000474272 MANSC4A6NHS7 340 aaPredicted RBP4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 HMGB1P09429 215 aaKnown RBP4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 FCER1AP12319 257 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 ITGB6P18564 788 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 FOLR3P41439 243 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 ABCB5Q2M3G0 1257 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 ODR4Q5SWX8 454 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 TSTD2Q5T7W7 516 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 SYDE2Q5VT97 1194 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 FITM2Q8N6M3 262 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 SLC30A5Q8TAD4 765 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 DPF2Q92785 391 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 TMEM125Q96AQ2 219 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 AHCYL2Q96HN2 611 aaKnown RBP4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 PNKPQ96T60 521 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 C14orf119Q9NWQ9 140 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 FAM30AQ9NZY2 134 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 ZBTB21Q9ULJ3 1066 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 DNM3Q9UQ16 869 aa4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 THRAP3Q9Y2W1 955 aaKnown RBP4.79□□□□□ -1.64
TMEM50B-208ENST00000474272 PROP1O75360 226 aa4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 GPR32O75388 356 aa4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 S100BP04271 92 aaPredicted RBP4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 GATA3P23771 443 aa4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 IARSP41252 1262 aaKnown RBP4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 MAPK10P53779 464 aa4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 MALLQ13021 153 aa4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 MTM1Q13496 603 aa4.78□□□□□ -1.64
TMEM50B-208ENST00000474272 INAVAQ3KP66 663 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms