RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 EMC3Q9P0I2 261 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 DENND2AQ9ULE3 1009 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 KIAA1024Q9UPX6 916 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 OR6C65A6NJZ3 312 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 C16orf96A6NNT2 1141 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 STMND1H3BQB6 276 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ALDH1A2O94788 518 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RTN3O95197 1032 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 POLR3DP05423 398 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 S100A9P06702 114 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 CDH3P22223 829 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 MSNP26038 577 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RPL9P32969 192 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RFC4P35249 363 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 HAND2P61296 217 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 NR5A1Q13285 461 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 BTG3Q14201 252 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 WDR43Q15061 677 aaKnown RBP eCLIP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 TAF12Q16514 161 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 CTC1Q2NKJ3 1217 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 FUT11Q495W5 492 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 FBXO48Q5FWF7 155 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ADALQ6DHV7 355 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 PM20D1Q6GTS8 502 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RPUSD3Q6P087 351 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 C15orf52Q6ZUT6 534 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 CHST15Q7LFX5 561 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 NANOGNBQ7Z5D8 188 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 C2CD5Q86YS7 1000 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 RASAL3Q86YV0 1011 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ANKRD35Q8N283 1001 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 CRACR2BQ8N4Y2 399 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ST13P5Q8NFI4 369 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 NPLOC4Q8TAT6 608 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 LTV1Q96GA3 475 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SHDQ96IW2 340 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 EAF1Q96JC9 268 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ART5Q96L15 291 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 TTC25Q96NG3 672 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 DHRS4Q9BTZ2 278 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 INTS2Q9H0H0 1204 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 TRIT1Q9H3H1 467 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 BICC1Q9H694 974 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ZNF277Q9NRM2 450 aaPredicted RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 IARS2Q9NSE4 1012 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 MOCS1Q9NZB8 636 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 AASSQ9UDR5 926 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SESN1Q9Y6P5 492 aa6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.52□□□□□ -1.37
SMARCE1-208ENST00000474246 ARHGAP10A1A4S6 786 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 KRT87PA6NCN2 255 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 FZD9O00144 591 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 MEN1O00255 615 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 CYTH3O43739 400 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 HPGDP15428 266 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 IL10P22301 178 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 KELP23276 732 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 TARSP26639 723 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 IL6STP40189 918 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 GPC3P51654 580 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 EIF6P56537 245 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 PPARDQ03181 441 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 MBTPS1Q14703 1052 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 FBXO43Q4G163 708 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 XKR9Q5GH70 373 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 RPS26P11Q5JNZ5 115 aaPredicted RBP6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 TTBK2Q6IQ55 1244 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 ANKRD52Q8NB46 1076 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 CEP70Q8NHQ1 597 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 AGR3Q8TD06 166 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 NUDCD1Q96RS6 583 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 FNBP1Q96RU3 617 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 HINFPQ9BQA5 517 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 STK31Q9BXU1 1019 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 ACTR10Q9NZ32 417 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 GGA3Q9NZ52 723 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 VPS18Q9P253 973 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 ZMYM5Q9UJ78 669 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 L1RE1Q9UN81 338 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 FLNBO75369 2602 aaKnown RBP6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 CHD6Q8TD26 2715 aa6.51□□□□□ -1.37
SMARCE1-208ENST00000474246 A0A087X0M5 115 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 IQANK1A0A1B0GTG1 560 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 A0A1B0GX30 115 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 F5H0A9 414 aaPredicted RBP6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 K7EPI3 171 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 DDX39AO00148 427 aaKnown RBP6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 TEX28O15482 410 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 NOL3O60936 208 aaKnown RBP6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 POU2F2P09086 479 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 LTA4HP09960 611 aaKnown RBP6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 POLR2MP0CAP2 368 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 ACTN1P12814 892 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 LAG3P18627 525 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 GDI1P31150 447 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 ACTN2P35609 894 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 MSH2P43246 934 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 HNMTP50135 292 aa6.5□□□□□ -1.37
SMARCE1-208ENST00000474246 CDK17Q00537 523 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms