RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
CCDC171-206ENST00000474193 GCNT3O95395 438 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 TKTP29401 623 aaKnown RBP20.23■□□□□ 0.83
CCDC171-206ENST00000474193 BEST2Q8NFU1 509 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 POMGNT1Q8WZA1 660 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 PBXIP1Q96AQ6 731 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 PANK4Q9NVE7 773 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 HOOK1Q9UJC3 728 aaKnown RBP20.23■□□□□ 0.83
CCDC171-206ENST00000474193 FBXW11Q9UKB1 542 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 AGO2Q9UKV8 859 aaKnown RBP20.23■□□□□ 0.83
CCDC171-206ENST00000474193 CDY1Q9Y6F8 540 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 TCHHQ07283 1943 aa20.23■□□□□ 0.83
CCDC171-206ENST00000474193 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.22■□□□□ 0.83
CCDC171-206ENST00000474193 TMEM221A6NGB7 291 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 LACTBL1A8MY62 500 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 I3L4J1 428 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 M0R296 226 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 KINO60870 393 aaKnown RBP20.22■□□□□ 0.83
CCDC171-206ENST00000474193 C8AP07357 584 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 PAX3P23760 479 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 AFMP43652 599 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 SUGP1Q8IWZ8 645 aaKnown RBP20.22■□□□□ 0.83
CCDC171-206ENST00000474193 C3orf58Q8NDZ4 430 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 HAPLN2Q9GZV7 340 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 KBTBD4Q9NVX7 518 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCDC171-206ENST00000474193 POLIQ9UNA4 740 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 ARIH1Q9Y4X5 557 aaPredicted RBP20.22■□□□□ 0.83
CCDC171-206ENST00000474193 CLUHO75153 1309 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 C5orf42Q9H799 3197 aa20.22■□□□□ 0.83
CCDC171-206ENST00000474193 ARHGEF37A1IGU5 675 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 TULP1O00294 542 aaPredicted RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 ACTN4O43707 911 aaKnown RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 LDHAP00338 332 aaKnown RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 HOXA9P31269 272 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 TNFSF9P41273 254 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 POU5F1Q01860 360 aaKnown RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 SPAG1Q07617 926 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 ENOX2Q16206 610 aaKnown RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 VARS2Q5ST30 1063 aaKnown RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 ZNF280DQ6N043 979 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 DSTYKQ6XUX3 929 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 KRBA2Q6ZNG9 492 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 BMP8AQ7Z5Y6 402 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 USP37Q86T82 979 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 DNAJC19Q96DA6 116 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 SUSD3Q96L08 255 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 FIZ1Q96SL8 496 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 OXCT2Q9BYC2 517 aaPredicted RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 ASB7Q9H672 318 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 TMEM206Q9H813 350 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 OLFML3Q9NRN5 406 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 TBC1D7Q9P0N9 293 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 CPSF3Q9UKF6 684 aaKnown RBP20.21■□□□□ 0.83
CCDC171-206ENST00000474193 PLXNA3P51805 1871 aa20.21■□□□□ 0.83
CCDC171-206ENST00000474193 ANKRD63C9JTQ0 380 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 MYL1P05976 194 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 LRPAP1P30533 357 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 ACOT2P49753 483 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 ARPP19P56211 112 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 ASIC1P78348 528 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 CTXN3Q4LDR2 81 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 L1TD1Q5T7N2 865 aaKnown RBP20.2■□□□□ 0.82
CCDC171-206ENST00000474193 CD300LGQ6UXG3 332 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 FMR1NBQ8N0W7 255 aaPredicted RBP20.2■□□□□ 0.82
CCDC171-206ENST00000474193 ZNF461Q8TAF7 563 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 PAGE5Q96GU1 130 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 IGSF9Q9P2J2 1179 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 TUBGCP4Q9UGJ1 667 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 DERAQ9Y315 318 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 MYO10Q9HD67 2058 aa20.2■□□□□ 0.82
CCDC171-206ENST00000474193 PRRG1O14668 218 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 TMEM132DQ14C87 1099 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 ZBTB6Q15916 424 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 HFE2Q6ZVN8 426 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 ENGASEQ8NFI3 743 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 SLC7A14Q8TBB6 771 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 NXPE3Q969Y0 559 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 CCDC47Q96A33 483 aaKnown RBP20.19■□□□□ 0.82
CCDC171-206ENST00000474193 ZNF707Q96C28 371 aaPredicted RBP20.19■□□□□ 0.82
CCDC171-206ENST00000474193 TIGD1Q96MW7 591 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 C7orf25Q9BPX7 421 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 LMBRD1Q9NUN5 540 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 PCDHB8Q9UN66 801 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 STYXL1Q9Y6J8 313 aa20.19■□□□□ 0.82
CCDC171-206ENST00000474193 ZFP37Q9Y6Q3 630 aaPredicted RBP20.19■□□□□ 0.82
CCDC171-206ENST00000474193 ADAM12O43184 909 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 IL18RAPO95256 599 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 PAPLNO95428 1278 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 LRG1P02750 347 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 ADRB2P07550 413 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 FSHRP23945 695 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 YWHAHQ04917 246 aaPredicted RBP20.18■□□□□ 0.82
CCDC171-206ENST00000474193 TDGQ13569 410 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 SNW1Q13573 536 aaKnown RBP20.18■□□□□ 0.82
CCDC171-206ENST00000474193 SPATA1Q5VX52 437 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 TPGS2Q68CL5 300 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 JADE1Q6IE81 842 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 SLC8B1Q6J4K2 584 aa20.18■□□□□ 0.82
CCDC171-206ENST00000474193 SLC39A4Q6P5W5 647 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms