RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 VAMP7P51809 220 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 YARSP54577 528 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 EPHB4P54760 987 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 MARSP56192 900 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 DLG4P78352 724 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 SPAG1Q07617 926 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PSMD6Q15008 389 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 KRT31Q15323 416 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 UVSSAQ2YD98 709 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PPP1R26Q5T8A7 1209 aaPredicted RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 AGMOQ6ZNB7 445 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 ZNF365Q70YC5 407 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 INTS8Q75QN2 995 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 OTOP2Q7RTS6 562 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 ZNF598Q86UK7 904 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 TRIM59Q8IWR1 403 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 CRIPAKQ8N1N5 446 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 RNF169Q8NCN4 708 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PLEKHO2Q8TD55 490 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PGBD4Q96DM1 585 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 NAP1L5Q96NT1 182 aaPredicted RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 TUBGCP2Q9BSJ2 902 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 VPS16Q9H269 839 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 CXCL16Q9H2A7 254 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PLEKHA5Q9HAU0 1116 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PDE11AQ9HCR9 933 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 UBN1Q9NPG3 1134 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 CYLDQ9NQC7 956 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 TMPRSS4Q9NRS4 437 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 RNF19AQ9NV58 838 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 LIMA1Q9UHB6 759 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 GIT1Q9Y2X7 761 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 PCDHB7Q9Y5E2 793 aa8.22□□□□□ -1.09
CCDC93-207ENST00000474006 KIAA0100Q14667 2235 aaKnown RBP8.22□□□□□ -1.09
CCDC93-207ENST00000474006 SMIM28A0A1B0GU29 152 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TTC26A0AVF1 554 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 FSD2A1L4K1 749 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 LILRA1O75019 489 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 OFD1O75665 1012 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 RECQL4O94761 1208 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 IL18RAPO95256 599 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 SERPINC1P01008 464 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 PFKMP08237 780 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TRIM49P0CI25 452 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TRIM49CP0CI26 452 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 DLATP10515 647 aaKnown RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ACTN1P12814 892 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ATF7P17544 494 aaPredicted RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TNNI1P19237 187 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 AFF1P51825 1210 aaKnown RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 COPB1P53618 953 aaKnown RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 FANCCQ00597 558 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ENPEPQ07075 957 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 BFSP1Q12934 665 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 NR1I3Q14994 352 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 SURF1Q15526 300 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 VWA3BQ502W6 1294 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 XKR4Q5GH76 650 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TMEM240Q5SV17 173 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 C1orf220Q5T0J3 134 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TCERG1LQ5VWI1 586 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 APTXQ7Z2E3 356 aaKnown RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 BRSK2Q8IWQ3 736 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 CD302Q8IX05 232 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 HACE1Q8IYU2 909 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ANKRD20A12PQ8NF67 263 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 SLC35C1Q96A29 364 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ZMAT2Q96NC0 199 aaKnown RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 FNBP1Q96RU3 617 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 GAD1Q99259 594 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 NDST4Q9H3R1 872 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ASB7Q9H672 318 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ELAC1Q9H777 363 aaKnown RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TOPORSQ9NS56 1045 aaPredicted RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ZNF358Q9NW07 568 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TMEM161AQ9NX61 479 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 MIOSQ9NXC5 875 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 TAB2Q9NYJ8 693 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 CXXC1Q9P0U4 656 aaPredicted RBP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 LRFN2Q9ULH4 789 aa8.21□□□□□ -1.1
CCDC93-207ENST00000474006 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.21□□□□□ -1.1
CCDC93-207ENST00000474006 ARL5CA6NH57 179 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 LRRIQ3A6PVS8 624 aaPredicted RBP8.2□□□□□ -1.1
CCDC93-207ENST00000474006 TMEM229AB2RXF0 380 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 PES1O00541 588 aaKnown RBP8.2□□□□□ -1.1
CCDC93-207ENST00000474006 AP5Z1O43299 807 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 EFCAB14O75071 495 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 BAIAP3O94812 1187 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 UPP2O95045 317 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 C4BPAP04003 597 aaKnown RBP8.2□□□□□ -1.1
CCDC93-207ENST00000474006 FGFR1P11362 822 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 KCNE1P15382 129 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 WEE1P30291 646 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 GCLMP48507 274 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 RGS19P49795 217 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 UBASH3AP57075 661 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 TFAMQ00059 246 aaKnown RBP8.2□□□□□ -1.1
CCDC93-207ENST00000474006 PPP2R3AQ06190 1150 aa8.2□□□□□ -1.1
CCDC93-207ENST00000474006 PPP3CAQ08209 521 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms