RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-223ENST00000473345 BRD9Q9H8M2 597 aa10.57□□□□□ -0.72
MCF2L-223ENST00000473345 ZFP14Q9HCL3 533 aa10.57□□□□□ -0.72
MCF2L-223ENST00000473345 SEMA4GQ9NTN9 838 aa10.57□□□□□ -0.72
MCF2L-223ENST00000473345 TUBGCP4Q9UGJ1 667 aa10.57□□□□□ -0.72
MCF2L-223ENST00000473345 TNFSF13BQ9Y275 285 aa10.57□□□□□ -0.72
MCF2L-223ENST00000473345 PIAS3Q9Y6X2 628 aa10.57□□□□□ -0.72
MCF2L-223ENST00000473345 PP2D1A8MPX8 630 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 HEPACAM2A8MVW5 462 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 SLC30A4O14863 429 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 CDKL5O76039 1030 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 PROZP22891 400 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 RPA1P27694 616 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 GUCY2FP51841 1108 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 SPAG1Q07617 926 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 TWF1Q12792 350 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 CCDC6Q16204 474 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 IL17AQ16552 155 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 SLC10A6Q3KNW5 377 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 DCAF4L1Q3SXM0 396 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 PPM1JQ5JR12 505 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 PDXDC1Q6P996 788 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 ZSCAN18Q8TBC5 510 aaPredicted RBP10.56□□□□□ -0.72
MCF2L-223ENST00000473345 GTF3C6Q969F1 213 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 ZFYVE19Q96K21 471 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 TMEM209Q96SK2 561 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 NELL2Q99435 816 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 RUSC1Q9BVN2 902 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 BHMT2Q9H2M3 363 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 TRPV4Q9HBA0 871 aa10.56□□□□□ -0.72
MCF2L-223ENST00000473345 TIMM13Q9Y5L4 95 aaPredicted RBP10.56□□□□□ -0.72
MCF2L-223ENST00000473345 TPRP12270 2363 aaKnown RBP10.55□□□□□ -0.72
MCF2L-223ENST00000473345 ACACBO00763 2458 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 SLC38A8A6NNN8 435 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PRR5-ARHGAP8B1AHC4 643 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PRRG1O14668 218 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PPEF2O14830 753 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 TM4SF5O14894 197 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 EPB41L2O43491 1005 aaKnown RBP10.55□□□□□ -0.72
MCF2L-223ENST00000473345 SOAT2O75908 522 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 LRG1P02750 347 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 MYL4P12829 197 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PSMC3P17980 439 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 NPTX2P47972 431 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 ARHGAP8P85298 464 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PTGDRQ13258 359 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 SF3A2Q15428 464 aaKnown RBP10.55□□□□□ -0.72
MCF2L-223ENST00000473345 ST3GAL2Q16842 350 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 TMEM132AQ24JP5 1023 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 HEATR6Q6AI08 1181 aaKnown RBP10.55□□□□□ -0.72
MCF2L-223ENST00000473345 LAIR1Q6GTX8 287 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PRR23CQ6ZRP0 262 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 PRR23BQ6ZRT6 265 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 RTL10Q7L3V2 364 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 BEST2Q8NFU1 509 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 RIN3Q8TB24 985 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 DDX12PQ92771 950 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 SMARCD2Q92925 531 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 SUSD3Q96L08 255 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 CCDC43Q96MW1 224 aaKnown RBP10.55□□□□□ -0.72
MCF2L-223ENST00000473345 TBC1D32Q96NH3 1257 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 NACC1Q96RE7 527 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 ADPGKQ9BRR6 497 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 C2orf40Q9H1Z8 148 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 SMOC1Q9H4F8 434 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 TRPV5Q9NQA5 729 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 CNTN3Q9P232 1028 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 YIPF1Q9Y548 306 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 CFAP47Q6ZTR5 3102 aa10.55□□□□□ -0.72
MCF2L-223ENST00000473345 MAP1BP46821 2468 aaKnown RBP10.55□□□□□ -0.72
MCF2L-223ENST00000473345 USP24Q9UPU5 2620 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 F5P12259 2224 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 A0A1W2PRU2 124 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 ARHGEF35A5YM69 484 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 SFI1A8K8P3 1242 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 E9PMD0 336 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 NCAM2O15394 837 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 MICAL2O94851 1124 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 PRAMEF12O95522 483 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 KCNE1P15382 129 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 XBP1P17861 261 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 CDC25AP30304 524 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 PXNP49023 591 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 PEX3P56589 373 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 CACNB1Q02641 598 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 TNK2Q07912 1038 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 SIM2Q14190 667 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 ZNF568Q3ZCX4 644 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 CTXN3Q4LDR2 81 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 NAIF1Q69YI7 327 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 GAREM2Q75VX8 874 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 PDZD4Q76G19 769 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 MFSD6LQ8IWD5 586 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 FAM160A2Q8N612 972 aaPredicted RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 GPR161Q8N6U8 529 aaKnown RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 CELF5Q8N6W0 485 aaKnown RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 UROC1Q96N76 676 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 PGLYRP2Q96PD5 576 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 MMTAG2Q9BU76 263 aaKnown RBP10.54□□□□□ -0.72
MCF2L-223ENST00000473345 GTSE1Q9NYZ3 720 aa10.54□□□□□ -0.72
MCF2L-223ENST00000473345 ARHGAP28Q9P2N2 729 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms