RNA–Protein interactions for RNA: ENST00000473221.5

APTX-217, Transcript of aprataxin, humanhuman

TSL 2

Gene APTX, Length 687 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-217ENST00000473221 SNX27Q96L92 541 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 AGPAT1Q99943 283 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 PI4K2AQ9BTU6 479 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 TRAIPQ9BWF2 469 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 EIF2AQ9BY44 585 aaKnown RBP10.85□□□□□ -0.67
APTX-217ENST00000473221 NIF3L1Q9GZT8 377 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 UNC93B1Q9H1C4 597 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 SNTG2Q9NY99 539 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 CNTN3Q9P232 1028 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 NAGPAQ9UK23 515 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 OGDHLQ9ULD0 1010 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 R3HCC1Q9Y3T6 440 aaKnown RBP10.85□□□□□ -0.67
APTX-217ENST00000473221 NUB1Q9Y5A7 615 aa10.85□□□□□ -0.67
APTX-217ENST00000473221 BTNL10A8MVZ5 291 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 ZNF623O75123 536 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 NFICP08651 508 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 GZMAP12544 262 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 P4HA1P13674 534 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 KCNE1P15382 129 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 ZSCAN20P17040 1043 aaPredicted RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 CAPN2P17655 700 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 CYP3A5P20815 502 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 ACO1P21399 889 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 CDK7P50613 346 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 RAB27AP51159 221 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 MYL6P60660 151 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 GNG11P61952 73 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 NFX1Q12986 1120 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 ZNF699Q32M78 642 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 ZNF667Q5HYK9 610 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 TWF2Q6IBS0 349 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 ALKBH5Q6P6C2 394 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 TTC39CQ8N584 583 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 UBR7Q8N806 425 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 C1orf127Q8N9H9 656 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 CXorf38Q8TB03 319 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 XYLT2Q9H1B5 865 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 APOBEC3GQ9HC16 384 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 ERVK-5Q9HDB9 667 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 LZTFL1Q9NQ48 299 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 TRMT13Q9NUP7 481 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 DPP3Q9NY33 737 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 UBQLN1Q9UMX0 589 aaKnown RBP10.84□□□□□ -0.67
APTX-217ENST00000473221 IPPQ9Y573 584 aa10.84□□□□□ -0.67
APTX-217ENST00000473221 DDX3XO00571 662 aaKnown RBP eCLIP10.83□□□□□ -0.684e-13■□□□□ 9.3
APTX-217ENST00000473221 CYP26A1O43174 497 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 RECQL4O94761 1208 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 CD4P01730 458 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 ITGB3P05106 788 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 CTSHP09668 335 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 H2AFZP0C0S5 128 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 PNMA6AP0CW24 399 aaPredicted RBP10.83□□□□□ -0.68
APTX-217ENST00000473221 SKIP12755 728 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 CCL5P13501 91 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 CYP11B1P15538 503 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 EN2P19622 333 aaPredicted RBP10.83□□□□□ -0.68
APTX-217ENST00000473221 USP8P40818 1118 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 PDE6CP51160 858 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 PAK2Q13177 524 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 SPOPLQ6IQ16 392 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 PPP1R2P3Q6NXS1 205 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 SYT10Q6XYQ8 523 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 H2AFVQ71UI9 128 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 MRPL10Q7Z7H8 261 aaKnown RBP10.83□□□□□ -0.68
APTX-217ENST00000473221 SMG8Q8ND04 991 aaKnown RBP10.83□□□□□ -0.68
APTX-217ENST00000473221 BEST2Q8NFU1 509 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 LNX1Q8TBB1 728 aaPredicted RBP10.83□□□□□ -0.68
APTX-217ENST00000473221 CAGE1Q8TC20 777 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 KIF12Q96FN5 646 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 FAM84AQ96KN4 292 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 CALR3Q96L12 384 aaKnown RBP10.83□□□□□ -0.68
APTX-217ENST00000473221 LACRTQ9GZZ8 138 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 CYP3A43Q9HB55 503 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 FAM105AQ9NUU6 356 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 DNAI1Q9UI46 699 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 SIX4Q9UIU6 781 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 PADI3Q9ULW8 664 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 PCDHB2Q9Y5E7 798 aa10.83□□□□□ -0.68
APTX-217ENST00000473221 A0A0A6YYK5 440 aaPredicted RBP10.82□□□□□ -0.68
APTX-217ENST00000473221 RCCD1A6NED2 376 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 RTN2O75298 545 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 SGPL1O95470 568 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 KRT19P08727 400 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 CKBP12277 381 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 KRT5P13647 590 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 ATF7P17544 494 aaPredicted RBP10.82□□□□□ -0.68
APTX-217ENST00000473221 CASQ1P31415 396 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 ZNF132P52740 706 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 TERF1P54274 439 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 CDR2Q01850 454 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 MYO1EQ12965 1108 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 TUBB2AQ13885 445 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 DSC3Q14574 896 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 LPIN1Q14693 890 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 IFI16Q16666 785 aaKnown RBP10.82□□□□□ -0.68
APTX-217ENST00000473221 ZNF618Q5T7W0 954 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 SLC47A2Q86VL8 602 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 LRRC52Q8N7C0 313 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 OLIG1Q8TAK6 271 aa10.82□□□□□ -0.68
APTX-217ENST00000473221 EPS8L1Q8TE68 723 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms