RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 RUBCNQ92622 972 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 NSUN4Q96CB9 384 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 ALG1Q9BT22 464 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 METTL22Q9BUU2 404 aaPredicted RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 ACAT2Q9BWD1 397 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 CYP4F12Q9HCS2 524 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 PNPLA8Q9NP80 782 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 INTS10Q9NVR2 710 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 DNAJC28Q9NX36 388 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 SERPINB13Q9UIV8 391 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 COQ6Q9Y2Z9 468 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 NOC2LQ9Y3T9 749 aaKnown RBP6.55□□□□□ -1.36
RTF1-203ENST00000473214 C2CD2Q9Y426 696 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 PCDHA8Q9Y5H6 950 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 SNX8Q9Y5X2 465 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 PIK3R4Q99570 1358 aa6.55□□□□□ -1.36
RTF1-203ENST00000473214 NKTRP30414 1462 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 PLEKHH2Q8IVE3 1493 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 RTEL1-TNFRSF6BF6WH68 1400 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 GOLGA6L3A6NEY3 463 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 CASQ2O14958 399 aaPredicted RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 THAP12O43422 761 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 PTP4A3O75365 173 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 USP2O75604 605 aaPredicted RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 ATP5BP06576 529 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 JUNBP17275 347 aaPredicted RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 GAP43P17677 238 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 PLCG1P19174 1290 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 BTF3P20290 206 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 CHMP24386 653 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 TMOD1P28289 359 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 STIP1P31948 543 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 RRP1P56182 461 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 KLHL30Q0D2K2 578 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 FOXO1Q12778 655 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 IKBKEQ14164 716 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 PTK2BQ14289 1009 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 SF1Q15637 639 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 TMEM266Q2M3C6 531 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 SLC35G1Q2M3R5 365 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 ZNF674Q2M3X9 581 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 ADCK5Q3MIX3 580 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 KLHDC7AQ5VTJ3 777 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 PAOXQ6QHF9 649 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 EP400NLQ6ZTU2 488 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 ZNF765Q7L2R6 523 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 MAEAQ7L5Y9 396 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 PPP1R42Q7Z4L9 355 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 CHD1LQ86WJ1 897 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 RAB11FIP4Q86YS3 637 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 ZC3H7AQ8IWR0 971 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 PPM1NQ8N819 430 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 FBXO30Q8TB52 745 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 DENND1AQ8TEH3 1009 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 HERVK_113Q902F9 699 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 APIPQ96GX9 242 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 DHRS1Q96LJ7 313 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 C16orf45Q96MC5 204 aaPredicted RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 KCNC2Q96PR1 638 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 CGRRF1Q99675 332 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 DDX23Q9BUQ8 820 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 AGXT2Q9BYV1 514 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 SOX17Q9H6I2 414 aaPredicted RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 KCND1Q9NSA2 647 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 ZNHIT6Q9NWK9 470 aaKnown RBP6.54□□□□□ -1.36
RTF1-203ENST00000473214 OXSMQ9NWU1 459 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 ATP23Q9Y6H3 246 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 MSH6P52701 1360 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 TMEM2Q9UHN6 1383 aa6.54□□□□□ -1.36
RTF1-203ENST00000473214 PTPDC1A2A3K4 754 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 SYT5O00445 386 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 CAPN9O14815 690 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 MTSS1O43312 755 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 NDUFS2O75306 463 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 USP1O94782 785 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 CHGBP05060 677 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 DRD2P14416 443 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 PAX7P23759 505 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 MAPK3P27361 379 aaPredicted RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 ARNTP27540 789 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 ADMP35318 185 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 MXI1P50539 228 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 ZBTB16Q05516 673 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 TFCP2Q12800 502 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 ACAP1Q15027 740 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 NFKBIBQ15653 356 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 EXOSC6Q5RKV6 272 aaKnown RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 UBXN11Q5T124 520 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 C10orf76Q5T2E6 689 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 NAA16Q6N069 864 aaPredicted RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 CDPF1Q6NVV7 123 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 RUFY3Q7L099 469 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 BEND5Q7L4P6 421 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 RALYLQ86SE5 291 aaKnown RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 NOSTRINQ8IVI9 506 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 TP53INP2Q8IXH6 220 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 CCDC144CPQ8IYA2 1237 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 PLD6Q8N2A8 252 aaKnown RBP6.53□□□□□ -1.36
RTF1-203ENST00000473214 PRR18Q8N4B5 295 aa6.53□□□□□ -1.36
RTF1-203ENST00000473214 GDAP1Q8TB36 358 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms