RNA–Protein interactions for RNA: ENST00000473191.1

USP40-212, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-212ENST00000473191 FAM212AQ96EL1 285 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 FGFBP2Q9BYJ0 223 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 TBC1D7Q9P0N9 293 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 KCNG1Q9UIX4 513 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 FBXL21Q9UKT6 434 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 CDH7Q9ULB5 785 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 USP34Q70CQ2 3546 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 ANK1P16157 1881 aa18.16■□□□□ 0.5
USP40-212ENST00000473191 H0YCG3 227 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 K7ELQ4 463 aaPredicted RBP18.15■□□□□ 0.5
USP40-212ENST00000473191 OGTO15294 1046 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 GALR2O43603 387 aaPredicted RBP18.15■□□□□ 0.5
USP40-212ENST00000473191 TBCAO75347 108 aaKnown RBP18.15■□□□□ 0.5
USP40-212ENST00000473191 VNN2O95498 520 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 NFICP08651 508 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 OR4Q2P0C623 313 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 PDCP20941 246 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 LRPAP1P30533 357 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 ACOT2P49753 483 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 CDR1P51861 262 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 UVSSAQ2YD98 709 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 CTXN3Q4LDR2 81 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 JADE1Q6IE81 842 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 ZSWIM2Q8NEG5 633 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 DNAJC19Q96DA6 116 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 INTS4Q96HW7 963 aaKnown RBP18.15■□□□□ 0.5
USP40-212ENST00000473191 MSTO1Q9BUK6 570 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 PLEKHA5Q9HAU0 1116 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 DAXXQ9UER7 740 aaPredicted RBP18.15■□□□□ 0.5
USP40-212ENST00000473191 CPSF3Q9UKF6 684 aaKnown RBP18.15■□□□□ 0.5
USP40-212ENST00000473191 MYH15Q9Y2K3 1946 aa18.15■□□□□ 0.5
USP40-212ENST00000473191 ADRB2P07550 413 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 RHOP08100 348 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 SRFP11831 508 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 ATF2P15336 505 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 CASP5P51878 434 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 WNT7BP56706 349 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 GPC5P78333 572 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 PPP2R3AQ06190 1150 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 PABPC1LQ4VXU2 614 aaKnown RBP18.14■□□□□ 0.49
USP40-212ENST00000473191 SCARA3Q6AZY7 606 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 RNF19BQ6ZMZ0 732 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 NPAS3Q8IXF0 933 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 TCEAL4Q96EI5 215 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 CRISPLD1Q9H336 500 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 RPF1Q9H9Y2 349 aaKnown RBP18.14■□□□□ 0.49
USP40-212ENST00000473191 CYP4F11Q9HBI6 524 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 DMDP11532 3685 aa18.14■□□□□ 0.49
USP40-212ENST00000473191 ARHGEF37A1IGU5 675 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 M0QZQ0 153 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 SPTLC1O15269 473 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 STX6O43752 255 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 XYLBO75191 536 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 PPP1R37O75864 691 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 CEBPBP17676 345 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 AOC1P19801 751 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 ADSSP30520 456 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 CCR2P41597 374 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 AARSP49588 968 aaKnown RBP eCLIP18.13■□□□□ 0.49
USP40-212ENST00000473191 CLCN5P51795 746 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 ADCY1Q08828 1119 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 FOXD4L5Q5VV16 416 aaPredicted RBP18.13■□□□□ 0.49
USP40-212ENST00000473191 RRAGBQ5VZM2 374 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 CRELD2Q6UXH1 353 aaPredicted RBP18.13■□□□□ 0.49
USP40-212ENST00000473191 ZNF720Q7Z2F6 126 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 HS6ST3Q8IZP7 471 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 KRI1Q8N9T8 703 aaKnown RBP18.13■□□□□ 0.49
USP40-212ENST00000473191 FOXD4L4Q8WXT5 416 aaPredicted RBP18.13■□□□□ 0.49
USP40-212ENST00000473191 ATOH1Q92858 354 aaPredicted RBP18.13■□□□□ 0.49
USP40-212ENST00000473191 MCRS1Q96EZ8 462 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 FAM84AQ96KN4 292 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 TMEM209Q96SK2 561 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 KXD1Q9BQD3 176 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 STRA6Q9BX79 667 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 PLA2G2FQ9BZM2 168 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 WNT16Q9UBV4 365 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 UBQLN1Q9UMX0 589 aaKnown RBP18.13■□□□□ 0.49
USP40-212ENST00000473191 PCDHB8Q9UN66 801 aa18.13■□□□□ 0.49
USP40-212ENST00000473191 POU2F2P09086 479 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 SLC39A14Q15043 492 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 PRSS36Q5K4E3 855 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 SPATA1Q5VX52 437 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 ZNF280DQ6N043 979 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 PGLYRP2Q96PD5 576 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 PRRX2Q99811 253 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 CORO1BQ9BR76 489 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 ST6GALNAC4Q9H4F1 302 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 TFIP11Q9UBB9 837 aaKnown RBP18.12■□□□□ 0.49
USP40-212ENST00000473191 STK17AQ9UEE5 414 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 CCDC39Q9UFE4 941 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 INSL5Q9Y5Q6 135 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 TSC2P49815 1807 aa18.12■□□□□ 0.49
USP40-212ENST00000473191 H7C4K7 107 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 PRRG1O14668 218 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 LRRN2O75325 713 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 LRG1P02750 347 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 CYP3A5P20815 502 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 ELF1P32519 619 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 ADALQ6DHV7 355 aa18.11■□□□□ 0.49
USP40-212ENST00000473191 TCEAL8Q8IYN2 117 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms