RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-204ENST00000472959 INTS8Q75QN2 995 aaKnown RBP22.46■■□□□ 1.19
TOP3A-204ENST00000472959 ZC3H3Q8IXZ2 948 aaKnown RBP22.46■■□□□ 1.19
TOP3A-204ENST00000472959 FAM186BQ8IYM0 893 aa22.46■■□□□ 1.19
TOP3A-204ENST00000472959 PARD3BQ8TEW8 1205 aa22.46■■□□□ 1.19
TOP3A-204ENST00000472959 CDCA3Q99618 268 aaPredicted RBP22.46■■□□□ 1.19
TOP3A-204ENST00000472959 TTPALQ9BTX7 342 aa22.46■■□□□ 1.19
TOP3A-204ENST00000472959 TLE6Q9H808 572 aa22.46■■□□□ 1.19
TOP3A-204ENST00000472959 PCDHGC5Q9Y5F6 944 aa22.46■■□□□ 1.19
TOP3A-204ENST00000472959 PRRC2BQ5JSZ5 2229 aaKnown RBP22.46■■□□□ 1.19
TOP3A-204ENST00000472959 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.45■■□□□ 1.18
TOP3A-204ENST00000472959 HIDE1A8MVS5 230 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 LILRB3O75022 631 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 FGFR3P22607 806 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 PNPLA4P41247 253 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 AARSP49588 968 aaKnown RBP eCLIP22.45■■□□□ 1.18
TOP3A-204ENST00000472959 CCDC85BQ15834 202 aaPredicted RBP22.45■■□□□ 1.18
TOP3A-204ENST00000472959 TTI2Q6NXR4 508 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 C1orf127Q8N9H9 656 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 SUSD3Q96L08 255 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 MTMR12Q9C0I1 747 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.45■■□□□ 1.18
TOP3A-204ENST00000472959 CTNND2Q9UQB3 1225 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 TRIP11Q15643 1979 aa22.45■■□□□ 1.18
TOP3A-204ENST00000472959 TRIM49BA6NDI0 452 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 IKBKBO14920 756 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 SYN3O14994 580 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 SLC16A3O15427 465 aaKnown RBP22.44■■□□□ 1.18
TOP3A-204ENST00000472959 EPB41P11171 864 aaKnown RBP22.44■■□□□ 1.18
TOP3A-204ENST00000472959 KRT13P13646 458 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 CA8P35219 290 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 BRCC3P46736 316 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 NLRP12P59046 1061 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 LILRA4P59901 499 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 RBP5P82980 135 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 CREMQ03060 361 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 PTPRJQ12913 1337 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 TMEM130Q8N3G9 435 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 CSGALNACT2Q8N6G5 542 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 OR5B17Q8NGF7 314 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 AUTS2Q8WXX7 1259 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 PPM1EQ8WY54 764 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 SYAP1Q96A49 352 aaPredicted RBP22.44■■□□□ 1.18
TOP3A-204ENST00000472959 CEP63Q96MT8 703 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 POP1Q99575 1024 aaKnown RBP22.44■■□□□ 1.18
TOP3A-204ENST00000472959 EMILIN2Q9BXX0 1053 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 GZF1Q9H116 711 aaPredicted RBP22.44■■□□□ 1.18
TOP3A-204ENST00000472959 PLXNA4Q9HCM2 1894 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 DACH1Q9UI36 760 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 RWDD2AQ9UIY3 292 aa22.44■■□□□ 1.18
TOP3A-204ENST00000472959 R3HCC1Q9Y3T6 440 aaKnown RBP22.44■■□□□ 1.18
TOP3A-204ENST00000472959 PPEF2O14830 753 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 ITGB3P05106 788 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 POLR2BP30876 1174 aaKnown RBP22.43■■□□□ 1.18
TOP3A-204ENST00000472959 VAMP7P51809 220 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 MCCD1P59942 119 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-204ENST00000472959 HYAL1Q12794 435 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 DUSP6Q16828 381 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 CT47A1Q5JQC4 288 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-204ENST00000472959 LMBRD2Q68DH5 695 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-204ENST00000472959 TRAPPC11Q7Z392 1133 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 ADGRD2Q7Z7M1 963 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 CEP57Q86XR8 500 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 LRRC52Q8N7C0 313 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 APPL2Q8NEU8 664 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 CXorf38Q8TB03 319 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 PLEKHO2Q8TD55 490 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 RIN2Q8WYP3 895 aaPredicted RBP22.43■■□□□ 1.18
TOP3A-204ENST00000472959 PIK3R5Q8WYR1 880 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 B3GALT6Q96L58 329 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 ZNF560Q96MR9 790 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 DUSP9Q99956 384 aaKnown RBP22.43■■□□□ 1.18
TOP3A-204ENST00000472959 RXFP1Q9HBX9 757 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 AGAP1Q9UPQ3 857 aa22.43■■□□□ 1.18
TOP3A-204ENST00000472959 ARHGEF37A1IGU5 675 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 LRRIQ3A6PVS8 624 aaPredicted RBP22.42■■□□□ 1.18
TOP3A-204ENST00000472959 I3L4J1 428 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 M0QZQ0 153 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 C2CD2LO14523 706 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 NRIP1P48552 1158 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 TAF6P49848 677 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 KLHL40Q2TBA0 621 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 RTP2Q5QGT7 225 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 RBM23Q86U06 439 aaKnown RBP22.42■■□□□ 1.18
TOP3A-204ENST00000472959 EEF2KMTQ96G04 330 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 BORCS6Q96GS4 357 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 FNIP2Q9P278 1114 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 SIX4Q9UIU6 781 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 PCDHB8Q9UN66 801 aa22.42■■□□□ 1.18
TOP3A-204ENST00000472959 PDCD11Q14690 1871 aaKnown RBP22.41■■□□□ 1.18
TOP3A-204ENST00000472959 FGFR1OPO95684 399 aaKnown RBP22.41■■□□□ 1.18
TOP3A-204ENST00000472959 KRT19P08727 400 aa22.41■■□□□ 1.18
TOP3A-204ENST00000472959 TKTP29401 623 aaKnown RBP22.41■■□□□ 1.18
TOP3A-204ENST00000472959 BFSP1Q12934 665 aa22.41■■□□□ 1.18
TOP3A-204ENST00000472959 COL19A1Q14993 1142 aa22.41■■□□□ 1.18
TOP3A-204ENST00000472959 SKIV2LQ15477 1246 aaKnown RBP22.41■■□□□ 1.18
TOP3A-204ENST00000472959 DPCR1Q3MIW9 517 aa22.41■■□□□ 1.18
TOP3A-204ENST00000472959 SV2CQ496J9 727 aa22.41■■□□□ 1.18
TOP3A-204ENST00000472959 DSTYKQ6XUX3 929 aa22.41■■□□□ 1.18
TOP3A-204ENST00000472959 ANKS3Q6ZW76 656 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms