RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 CCDC43Q96MW1 224 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 NAP1L5Q96NT1 182 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 C7orf25Q9BPX7 421 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 LRRC27Q9C0I9 530 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 TMEM117Q9H0C3 514 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 TSPAN10Q9H1Z9 355 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 PDCL3Q9H2J4 239 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 ATP6V0A4Q9HBG4 840 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 TMEM161AQ9NX61 479 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 WRAP73Q9P2S5 460 aaPredicted RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 SLC9A2Q9UBY0 812 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 DBR1Q9UK59 544 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 ST3GAL5Q9UNP4 418 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 DNM3Q9UQ16 869 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 CTNND2Q9UQB3 1225 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 GDAQ9Y2T3 454 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 FLNBO75369 2602 aaKnown RBP7□□□□□ -1.29
HDAC1-205ENST00000472928 ZZEF1O43149 2961 aa7□□□□□ -1.29
HDAC1-205ENST00000472928 NPHP3-ACAD11A0A0J9YXS1 232 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 DENND3A2RUS2 1198 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 ARHGEF35A5YM69 484 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 BECN2A8MW95 431 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 GOLGA6L19H0YKK7 550 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 MAFGO15525 162 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 TBCAO75347 108 aaKnown RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 RPS6KA5O75582 802 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 RHOBTB3O94955 611 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 P4HBP07237 508 aaKnown RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 ADH1AP07327 375 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 PSAPP07602 524 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 IDEP14735 1019 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 CYP11B2P19099 503 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 QARSP47897 775 aaKnown RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 SLC12A3P55017 1021 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 ACTR2P61160 394 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 PRKCEQ02156 737 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 RAD51AP2Q09MP3 1159 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 KCNB1Q14721 858 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 IQCB1Q15051 598 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 CLLU1OSQ5K130 101 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 KLHL10Q6JEL2 608 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 MIS18BP1Q6P0N0 1132 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 MTHFD1LQ6UB35 978 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 FAM43BQ6ZT52 329 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 UNC13DQ70J99 1090 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 TMEM173Q86WV6 379 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 DHX40Q8IX18 779 aaKnown RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 SMAP1Q8IYB5 467 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 KIAA0319LQ8IZA0 1049 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 LRRC43Q8N309 656 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 NME8Q8N427 588 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 SUMF1Q8NBK3 374 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 PIGOQ8TEQ8 1089 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 RUBCNQ92622 972 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF558Q96NG5 402 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 HSD17B14Q9BPX1 270 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 RUSC1Q9BVN2 902 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 BHMT2Q9H2M3 363 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 ELAC1Q9H777 363 aaKnown RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 ZSWIM4Q9H7M6 989 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 KCNK12Q9HB15 430 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 RAB6BQ9NRW1 208 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 DZANK1Q9NVP4 752 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 SPG21Q9NZD8 308 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 DLGAP2Q9P1A6 1054 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 FBXL21Q9UKT6 434 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 GINS2Q9Y248 185 aa6.99□□□□□ -1.29
HDAC1-205ENST00000472928 DNMT3AQ9Y6K1 912 aaPredicted RBP6.99□□□□□ -1.29
HDAC1-205ENST00000472928 A6NJY4 79 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 ZBTB42B2RXF5 422 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 N4BP1O75113 896 aaKnown RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 SLITRK3O94933 977 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 IL2RAP01589 272 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 SP9P0CG40 484 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 XRCC6P12956 609 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 KLRC1P26715 233 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 PSMC5P62195 406 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 TPM4P67936 248 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 MYL5Q02045 173 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 KRT17Q04695 432 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 STIM1Q13586 685 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 ST3GAL2Q16842 350 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 UVSSAQ2YD98 709 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 FAM26FQ5R3K3 315 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 ZNF658Q5TYW1 1059 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 PLA2G4FQ68DD2 849 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 CNNM4Q6P4Q7 775 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 TMC5Q6UXY8 1006 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 CCDC149Q6ZUS6 474 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 OTOP3Q7RTS5 596 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 PLPPR4Q7Z2D5 763 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 GPR149Q86SP6 731 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 CCDC60Q8IWA6 550 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 CCDC65Q8IXS2 484 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 SYT2Q8N9I0 419 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 KDF1Q8NAX2 398 aaPredicted RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 MLKLQ8NB16 471 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 AUTS2Q8WXX7 1259 aa6.98□□□□□ -1.29
HDAC1-205ENST00000472928 ANP32BQ92688 251 aaKnown RBP6.98□□□□□ -1.29
HDAC1-205ENST00000472928 HPS3Q969F9 1004 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms