RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 CACNA2D1P54289 1103 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 SLFN5Q08AF3 891 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 ZNF362Q5T0B9 420 aaPredicted RBP6.35□□□□□ -1.39
CD46-213ENST00000471987 ZKSCAN2Q63HK3 967 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 MIGA2Q7L4E1 593 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 RSPH3Q86UC2 560 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 CNTD1Q8N815 330 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 PDLIM2Q96JY6 352 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 HEPHQ9BQS7 1158 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 TDP1Q9NUW8 608 aa6.35□□□□□ -1.39
CD46-213ENST00000471987 PEX1O43933 1283 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 ZFPL1O95159 310 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 MTHFD1P11586 935 aaKnown RBP6.34□□□□□ -1.39
CD46-213ENST00000471987 FCER1AP12319 257 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.34□□□□□ -1.39
CD46-213ENST00000471987 SSH3Q8TE77 659 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 FAM126AQ9BYI3 521 aaPredicted RBP6.34□□□□□ -1.39
CD46-213ENST00000471987 SEMA4GQ9NTN9 838 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 SLC5A4Q9NY91 659 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 SLC17A6Q9P2U8 582 aa6.34□□□□□ -1.39
CD46-213ENST00000471987 POLR2AP24928 1970 aaKnown RBP6.34□□□□□ -1.39
CD46-213ENST00000471987 A0A1W2PS29 197 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 MGST3O14880 152 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 NDUFS2O75306 463 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 SLC16A1P53985 500 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 CDC42EP1Q00587 391 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 PABPC1LQ4VXU2 614 aaKnown RBP6.33□□□□□ -1.4
CD46-213ENST00000471987 PGM2L1Q6PCE3 622 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 NECAB2Q7Z6G3 386 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 DCBLD1Q8N8Z6 715 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 Q8NA96 180 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 HDAC10Q969S8 669 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 TMX3Q96JJ7 454 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 MKS1Q9NXB0 559 aa6.33□□□□□ -1.4
CD46-213ENST00000471987 GRM6O15303 877 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 SLC6A4P31645 630 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 FOLR3P41439 243 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 NHLH1Q02575 133 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 TARDBPQ13148 414 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD46-213ENST00000471987 SF3B3Q15393 1217 aaKnown RBP6.32□□□□□ -1.4
CD46-213ENST00000471987 INAVAQ3KP66 663 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 EGFLAMQ63HQ2 1017 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 CLNKQ7Z7G1 428 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 ARHGEF25Q86VW2 580 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 DDX42Q86XP3 938 aaKnown RBP eCLIP6.32□□□□□ -1.4
CD46-213ENST00000471987 NEU2Q9Y3R4 380 aa6.32□□□□□ -1.4
CD46-213ENST00000471987 PRAMEF33A0A0G2JMD5 474 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 YY2O15391 372 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 SGTAO43765 313 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 ORC4O43929 436 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 PRAMEF10O60809 474 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 AGFG2O95081 481 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 SRGNP10124 158 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 ZNF844Q08AG5 666 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 ACAP2Q15057 778 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 UTP14CQ5TAP6 766 aaKnown RBP6.31□□□□□ -1.4
CD46-213ENST00000471987 C1orf162Q8NEQ5 155 aaPredicted RBP6.31□□□□□ -1.4
CD46-213ENST00000471987 JADE3Q92613 823 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 INTS13Q9NVM9 706 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 TUBD1Q9UJT1 453 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 PCDHA13Q9Y5I0 950 aa6.31□□□□□ -1.4
CD46-213ENST00000471987 CCDC151A5D8V7 595 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 MATN4O95460 622 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 CDK4P11802 303 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 KCNA2P16389 499 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
CD46-213ENST00000471987 RPS7P62081 194 aaKnown RBP6.3□□□□□ -1.4
CD46-213ENST00000471987 RAB39AQ14964 217 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 KIAA0895LQ68EN5 471 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 CBARPQ8N350 705 aaPredicted RBP6.3□□□□□ -1.4
CD46-213ENST00000471987 IL17RDQ8NFM7 739 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 IFI44Q8TCB0 444 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 ZNF384Q8TF68 577 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 RAB24Q969Q5 203 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 TMEM125Q96AQ2 219 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 TLR10Q9BXR5 811 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 KLK15Q9H2R5 256 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 JKAMPQ9P055 326 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 CDYLQ9Y232 598 aa6.3□□□□□ -1.4
CD46-213ENST00000471987 MPPED1O15442 326 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 PROP1O75360 226 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 C1QL1O75973 258 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 SBK3P0C264 359 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 FPGSQ05932 587 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 NBPF8Q3BBV2 869 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 PPP4R3AQ6IN85 833 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 VWA1Q6PCB0 445 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 GRASPQ7Z6J2 395 aaPredicted RBP6.29□□□□□ -1.4
CD46-213ENST00000471987 FAXDC2Q96IV6 333 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 SPC25Q9HBM1 224 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.29□□□□□ -1.4
CD46-213ENST00000471987 ATP8A1Q9Y2Q0 1164 aa6.29□□□□□ -1.4
CD46-213ENST00000471987 KLHL33A6NCF5 533 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 PROM1O43490 865 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 C5AR1P21730 350 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 AKNAD1Q5T1N1 836 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 KAZNQ674X7 775 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 GADL1Q6ZQY3 521 aa6.28□□□□□ -1.4
CD46-213ENST00000471987 ZNF365Q70YC5 407 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms