RNA–Protein interactions for RNA: ENST00000471812.5

GGPS1-204, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2

Gene GGPS1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-204ENST00000471812 PODXLO00592 558 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 CLDN3O15551 220 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 CUTAO60888 179 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 B3GAT3O94766 335 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 ASGR2P07307 311 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 IDEP14735 1019 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 KCNE1P15382 129 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 MATR3P43243 847 aaKnown RBP eCLIP10.29□□□□□ -0.76
GGPS1-204ENST00000471812 LIG4P49917 911 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 SMTNP53814 917 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 ZBTB6Q15916 424 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 PSMD5Q16401 504 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 USP41Q3LFD5 358 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 PUS10Q3MIT2 529 aaKnown RBP10.29□□□□□ -0.76
GGPS1-204ENST00000471812 RESP18Q5W5W9 173 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 SV2BQ7L1I2 683 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 EFCAB13Q8IY85 973 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 KCTD17Q8N5Z5 321 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 RSPH1Q8WYR4 309 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 KCNN1Q92952 543 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 SAAL1Q96ER3 474 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 LRFN3Q9BTN0 628 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 PHF7Q9BWX1 381 aaPredicted RBP10.29□□□□□ -0.76
GGPS1-204ENST00000471812 CCDC39Q9UFE4 941 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 CPSF3Q9UKF6 684 aaKnown RBP10.29□□□□□ -0.76
GGPS1-204ENST00000471812 RCOR1Q9UKL0 485 aa10.29□□□□□ -0.76
GGPS1-204ENST00000471812 TIMM13Q9Y5L4 95 aaPredicted RBP10.29□□□□□ -0.76
GGPS1-204ENST00000471812 SPTLC1O15269 473 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 OGTO15294 1046 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 POLR2DO15514 142 aaKnown RBP10.28□□□□□ -0.76
GGPS1-204ENST00000471812 GCNT3O95395 438 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 VNN2O95498 520 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 FGFR3P22607 806 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 AFMP43652 599 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 CUL4BQ13620 913 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 DMRTA1Q5VZB9 504 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 JADE1Q6IE81 842 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 KIAA1841Q6NSI8 718 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 CCDC73Q6ZRK6 1079 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 LEO1Q8WVC0 666 aaPredicted RBP10.28□□□□□ -0.76
GGPS1-204ENST00000471812 PIK3R5Q8WYR1 880 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 CBWD1Q9BRT8 395 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 TTPALQ9BTX7 342 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 MSTO1Q9BUK6 570 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 TRIM9Q9C026 710 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 GOLPH3LQ9H4A5 285 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 PCIF1Q9H4Z3 704 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 MRPL44Q9H9J2 332 aaKnown RBP10.28□□□□□ -0.76
GGPS1-204ENST00000471812 PANK4Q9NVE7 773 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 KBTBD4Q9NVX7 518 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 PRKAG3Q9UGI9 489 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 SERTAD1Q9UHV2 236 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 SF3B1O75533 1304 aaKnown RBP eCLIP10.28□□□□□ -0.769e-6■■■■■ 68.9
GGPS1-204ENST00000471812 PTPRJQ12913 1337 aa10.28□□□□□ -0.76
GGPS1-204ENST00000471812 KMT2EQ8IZD2 1858 aa10.27□□□□□ -0.76
GGPS1-204ENST00000471812 A0A1B0GVL5 298 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 TMEM189-UBE2V1I3L0A0 370 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 ARHGAP33O14559 1287 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 ACTN4O43707 911 aaKnown RBP10.27□□□□□ -0.77
GGPS1-204ENST00000471812 GLUD1P00367 558 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 PDGFBP01127 241 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-204ENST00000471812 ADRB2P07550 413 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 CLTAP09496 248 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 OR4Q2P0C623 313 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 OR1D2P34982 312 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 ME1P48163 572 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 YARSP54577 528 aaKnown RBP10.27□□□□□ -0.77
GGPS1-204ENST00000471812 HERC4Q5GLZ8 1057 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-204ENST00000471812 L1TD1Q5T7N2 865 aaKnown RBP10.27□□□□□ -0.77
GGPS1-204ENST00000471812 LMBRD2Q68DH5 695 aaPredicted RBP10.27□□□□□ -0.77
GGPS1-204ENST00000471812 DCLRE1AQ6PJP8 1040 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 GPR149Q86SP6 731 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 MYADMQ96S97 322 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 TMEM209Q96SK2 561 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 EMILIN2Q9BXX0 1053 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 ST6GALNAC4Q9H4F1 302 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 HCFC1R1Q9NWW0 138 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 MTRRQ9UBK8 725 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 CDY1Q9Y6F8 540 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 STYXL1Q9Y6J8 313 aa10.27□□□□□ -0.77
GGPS1-204ENST00000471812 WDFY4Q6ZS81 3184 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 CCDC195A0A1B0GUA6 201 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 WDR27A2RRH5 827 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 CCL16O15467 120 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 DCXO43602 365 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 KLRC4O43908 158 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 TBC1D4O60343 1298 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 NR1I2O75469 434 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 SEC24AO95486 1093 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 ADH1AP07327 375 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 PFKFB1P16118 471 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 HOXB8P17481 243 aaPredicted RBP10.26□□□□□ -0.77
GGPS1-204ENST00000471812 TXLNAP40222 546 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 EHHADHQ08426 723 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 CCDC142Q17RM4 750 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 ADALQ6DHV7 355 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.26□□□□□ -0.77
GGPS1-204ENST00000471812 TTC9BQ8N6N2 239 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 TMEM87AQ8NBN3 555 aa10.26□□□□□ -0.77
GGPS1-204ENST00000471812 KREMEN2Q8NCW0 462 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms