RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 TLE6Q9H808 572 aa16.34■□□□□ 0.21
SNX13-205ENST00000471744 INTS13Q9NVM9 706 aa16.34■□□□□ 0.21
SNX13-205ENST00000471744 R3HCC1Q9Y3T6 440 aaKnown RBP16.34■□□□□ 0.21
SNX13-205ENST00000471744 TULP1O00294 542 aaPredicted RBP16.33■□□□□ 0.2
SNX13-205ENST00000471744 PIRO00625 290 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 SRGAP2BP0DMP2 458 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 DLATP10515 647 aaKnown RBP16.33■□□□□ 0.2
SNX13-205ENST00000471744 TNNI1P19237 187 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 BMP6P22004 513 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 FGFR3P22607 806 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 PSMC2P35998 433 aaKnown RBP16.33■□□□□ 0.2
SNX13-205ENST00000471744 WNT7BP56706 349 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 CCDC85BQ15834 202 aaPredicted RBP16.33■□□□□ 0.2
SNX13-205ENST00000471744 KIAA0319Q5VV43 1072 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 CD300LGQ6UXG3 332 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 INTS8Q75QN2 995 aaKnown RBP16.33■□□□□ 0.2
SNX13-205ENST00000471744 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 MLKLQ8NB16 471 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 C3orf58Q8NDZ4 430 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 TMC2Q8TDI7 906 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 PPM1EQ8WY54 764 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 PIK3R5Q8WYR1 880 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 SUSD3Q96L08 255 aa16.33■□□□□ 0.2
SNX13-205ENST00000471744 HIDE1A8MVS5 230 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 PPP1R3GB7ZBB8 358 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 LILRB3O75022 631 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 EPB41P11171 864 aaKnown RBP16.32■□□□□ 0.2
SNX13-205ENST00000471744 KRT13P13646 458 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 NRIP1P48552 1158 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 AARSP49588 968 aaKnown RBP eCLIP16.32■□□□□ 0.2
SNX13-205ENST00000471744 CASP4P49662 377 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 TAF6P49848 677 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 GUCY2FP51841 1108 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 RBP5P82980 135 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 PAK1Q13153 545 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 COL19A1Q14993 1142 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 SKIV2LQ15477 1246 aaKnown RBP16.32■□□□□ 0.2
SNX13-205ENST00000471744 DUSP6Q16828 381 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 ANKRD40Q6AI12 368 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 KLHL10Q6JEL2 608 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 ANKS3Q6ZW76 656 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 ZC3H3Q8IXZ2 948 aaKnown RBP16.32■□□□□ 0.2
SNX13-205ENST00000471744 FAM186BQ8IYM0 893 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 LRRC52Q8N7C0 313 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 EFHBQ8N7U6 833 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 APPL2Q8NEU8 664 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 PARD3BQ8TEW8 1205 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 NELFBQ8WX92 580 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 RIN2Q8WYP3 895 aaPredicted RBP16.32■□□□□ 0.2
SNX13-205ENST00000471744 SYAP1Q96A49 352 aaPredicted RBP16.32■□□□□ 0.2
SNX13-205ENST00000471744 CCDC127Q96BQ5 260 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 MTMR12Q9C0I1 747 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 RXFP1Q9HBX9 757 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 FNIP2Q9P278 1114 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 COG5Q9UP83 839 aa16.32■□□□□ 0.2
SNX13-205ENST00000471744 MTCL1Q9Y4B5 1905 aaKnown RBP16.32■□□□□ 0.2
SNX13-205ENST00000471744 M0QZQ0 153 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 IKBKBO14920 756 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 SLC16A3O15427 465 aaKnown RBP16.31■□□□□ 0.2
SNX13-205ENST00000471744 C1RP00736 705 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 ADH1AP07327 375 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 CD44P16070 742 aaKnown RBP16.31■□□□□ 0.2
SNX13-205ENST00000471744 BRCC3P46736 316 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 LILRA4P59901 499 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 CLDN10P78369 228 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 HYAL1Q12794 435 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 SV2CQ496J9 727 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 RBM43Q6ZSC3 357 aaKnown RBP16.31■□□□□ 0.2
SNX13-205ENST00000471744 TAS1R1Q7RTX1 841 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 ADGRD2Q7Z7M1 963 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 CEP57Q86XR8 500 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 CSGALNACT2Q8N6G5 542 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 C1orf127Q8N9H9 656 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 PABPC5Q96DU9 382 aaKnown RBP16.31■□□□□ 0.2
SNX13-205ENST00000471744 CEP63Q96MT8 703 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 PCDHB8Q9UN66 801 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 PCDHGC5Q9Y5F6 944 aa16.31■□□□□ 0.2
SNX13-205ENST00000471744 H7C4K7 107 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 C2CD2LO14523 706 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 AKAP3O75969 853 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 FGFR1OPO95684 399 aaKnown RBP16.3■□□□□ 0.2
SNX13-205ENST00000471744 ITGB3P05106 788 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 POLR2BP30876 1174 aaKnown RBP16.3■□□□□ 0.2
SNX13-205ENST00000471744 VAMP7P51809 220 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 MYO1EQ12965 1108 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 PSMD5Q16401 504 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 CT47A1Q5JQC4 288 aaPredicted RBP16.3■□□□□ 0.2
SNX13-205ENST00000471744 RTP2Q5QGT7 225 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 DSTYKQ6XUX3 929 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 RBM23Q86U06 439 aaKnown RBP16.3■□□□□ 0.2
SNX13-205ENST00000471744 OR5B17Q8NGF7 314 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 AUTS2Q8WXX7 1259 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 HLA-CQ95604 372 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 KLHL5Q96PQ7 755 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 OXCT2Q9BYC2 517 aaPredicted RBP16.3■□□□□ 0.2
SNX13-205ENST00000471744 DSEQ9UL01 958 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 AGAP1Q9UPQ3 857 aa16.3■□□□□ 0.2
SNX13-205ENST00000471744 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms