RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 NRG4Q8WWG1 115 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 HSFX1Q9UBD0 423 aa4.68□□□□□ -1.66
PRPF40A-207ENST00000471701 YY2O15391 372 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 PROP1O75360 226 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 MATN4O95460 622 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 AGXTP21549 392 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 ATP8B2P98198 1209 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 NHLH1Q02575 133 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 ZNF844Q08AG5 666 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 SF3B3Q15393 1217 aaKnown RBP4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 DACT2Q5SW24 774 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 GIMAP6Q6P9H5 292 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 PGM2L1Q6PCE3 622 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 LHFPL2Q6ZUX7 228 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 CLNKQ7Z7G1 428 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 ZGPATQ8N5A5 531 aaKnown RBP4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 OR2I1PQ8NGU4 316 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 SSH3Q8TE77 659 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 KLK15Q9H2R5 256 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 TDP1Q9NUW8 608 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 INTS13Q9NVM9 706 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 NEU2Q9Y3R4 380 aa4.67□□□□□ -1.66
PRPF40A-207ENST00000471701 HAUS5O94927 633 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 AGFG2O95081 481 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 RPS7P62081 194 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 HNRNPA0Q13151 305 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 KLF1Q13351 362 aaPredicted RBP4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 UTP14CQ5TAP6 766 aaKnown RBP4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 MIGA2Q7L4E1 593 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 COG1Q8WTW3 980 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 SSH1Q8WYL5 1049 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 FBXL20Q96IG2 436 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 TMX1Q9H3N1 280 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 IL17RBQ9NRM6 502 aa4.66□□□□□ -1.66
PRPF40A-207ENST00000471701 PRAMEF33A0A0G2JMD5 474 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 MGST3O14880 152 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 MPPED1O15442 326 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 PRAMEF10O60809 474 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 SRGNP10124 158 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 FCER1AP12319 257 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 WASP42768 502 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC16A1P53985 500 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 ERVK-21P61565 698 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 SLFN5Q08AF3 891 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 PABPC1LQ4VXU2 614 aaKnown RBP4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 VWA1Q6PCB0 445 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 AOPEPQ8N6M6 819 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 Q8NA96 180 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 HDAC10Q969S8 669 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 TMEM125Q96AQ2 219 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 TMX3Q96JJ7 454 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 UROC1Q96N76 676 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 CPNE5Q9HCH3 593 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 ZNF277Q9NRM2 450 aaPredicted RBP4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 ASB6Q9NWX5 421 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 FRMD4BQ9Y2L6 1034 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 PCDHA13Q9Y5I0 950 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 PHLDB1Q86UU1 1377 aa4.65□□□□□ -1.67
PRPF40A-207ENST00000471701 A0A1W2PS29 197 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 K7ESF4 209 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 GRM6O15303 877 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 ZFPL1O95159 310 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 RPLP2P05387 115 aaKnown RBP4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 VIL1P09327 827 aaKnown RBP4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 KCNA2P16389 499 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 DYRK1AQ13627 763 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 ACAP2Q15057 778 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 NBPF8Q3BBV2 869 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 PREPLQ4J6C6 727 aaPredicted RBP4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 LRCH2Q5VUJ6 765 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 IL17RDQ8NFM7 739 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 TOR1AIP2Q8NFQ8 470 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 PGBD1Q96JS3 809 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 PACSIN1Q9BY11 444 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 MKS1Q9NXB0 559 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC5A4Q9NY91 659 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 MCM8Q9UJA3 840 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 PRKAB1Q9Y478 270 aa4.64□□□□□ -1.67
PRPF40A-207ENST00000471701 ARHGEF17Q96PE2 2063 aaPredicted RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 TRIM75PA6NK02 468 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 INO80B-WBP1J3KQ70 363 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 RBMXL2O75526 392 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 GPD1P21695 349 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 GATA3P23771 443 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 GRIA3P42263 894 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 ABCG1P45844 678 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 CDC42EP1Q00587 391 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 SRSF4Q08170 494 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 CD300EQ496F6 205 aaPredicted RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 PPP4R3AQ6IN85 833 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 GADL1Q6ZQY3 521 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC30A5Q8TAD4 765 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 TFAP2BQ92481 460 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 NAF1Q96HR8 494 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 TIMP4Q99727 224 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 SLC29A3Q9BZD2 475 aa4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 INO80BQ9C086 356 aaPredicted RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 PUS7LQ9H0K6 701 aaKnown RBP4.63□□□□□ -1.67
PRPF40A-207ENST00000471701 KMT5AQ9NQR1 393 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms