RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 TUSC3Q13454 348 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 KLHDC7AQ5VTJ3 777 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 SPECC1LQ69YQ0 1117 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 PHLDB3Q6NSJ2 640 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 DRC7Q8IY82 874 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 ZNF689Q96CS4 500 aaPredicted RBP20.67■□□□□ 0.9
PSPC1-203ENST00000471658 GANQ9H2C0 597 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 NRDE2Q9H7Z3 1164 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 KANSL3Q9P2N6 904 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 NUB1Q9Y5A7 615 aa20.67■□□□□ 0.9
PSPC1-203ENST00000471658 COL4A6Q14031 1691 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 F8W810 466 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 CDC25BP30305 580 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 DSC1Q08554 894 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 SHHQ15465 462 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 RRAGAQ7L523 313 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 CPLX3Q8WVH0 158 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 KAT5Q92993 513 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 HPDLQ96IR7 371 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 SLC4A7Q9Y6M7 1214 aa20.66■□□□□ 0.9
PSPC1-203ENST00000471658 PODXLO00592 558 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 SPTLC1O15269 473 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 CLSTN1O94985 981 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 ASS1P00966 412 aaKnown RBP20.65■□□□□ 0.9
PSPC1-203ENST00000471658 GOLGA8FQ08AF8 430 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 GOLGA8DPQ0D2H9 430 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 SGSM1Q2NKQ1 1148 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 COLGALT2Q8IYK4 626 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 C3orf58Q8NDZ4 430 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 NEK11Q8NG66 645 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 RC3H2Q9HBD1 1191 aaKnown RBP20.65■□□□□ 0.9
PSPC1-203ENST00000471658 PLCB1Q9NQ66 1216 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 POLIQ9UNA4 740 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 FHOD1Q9Y613 1164 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 ITIH6Q6UXX5 1313 aa20.65■□□□□ 0.9
PSPC1-203ENST00000471658 NOP14P78316 857 aaKnown RBP20.64■□□□□ 0.9
PSPC1-203ENST00000471658 UPP1Q16831 310 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 ZNF699Q32M78 642 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 WDR44Q5JSH3 913 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 RASIP1Q5U651 963 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 CD300LGQ6UXG3 332 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 NT5C1BQ96P26 610 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 FAM193BQ96PV7 902 aaPredicted RBP20.64■□□□□ 0.9
PSPC1-203ENST00000471658 UBE2TQ9NPD8 197 aaPredicted RBP20.64■□□□□ 0.9
PSPC1-203ENST00000471658 NLRC4Q9NPP4 1024 aa20.64■□□□□ 0.9
PSPC1-203ENST00000471658 R3HCC1Q9Y3T6 440 aaKnown RBP20.64■□□□□ 0.9
PSPC1-203ENST00000471658 TDRD15B5MCY1 1934 aaKnown RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 FNDC1Q4ZHG4 1894 aaPredicted RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 GJB5O95377 273 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 UCHL3P15374 230 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 PBX3P40426 434 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 OR1G1P47890 313 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 RGS19P49795 217 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 POLR2FP61218 127 aaKnown RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 TBX2Q13207 712 aaPredicted RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 IQCEQ6IPM2 695 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 ANP32BQ92688 251 aaKnown RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 TTYH3Q9C0H2 523 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 CWH43Q9H720 699 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 NXF1Q9UBU9 619 aaKnown RBP20.64■□□□□ 0.89
PSPC1-203ENST00000471658 APEX2Q9UBZ4 518 aa20.64■□□□□ 0.89
PSPC1-203ENST00000471658 ZC3H11AO75152 810 aaKnown RBP eCLIP20.63■□□□□ 0.89
PSPC1-203ENST00000471658 GYPCP04921 128 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 ATP2A2P16615 1042 aaKnown RBP20.63■□□□□ 0.89
PSPC1-203ENST00000471658 TRIM21P19474 475 aaKnown RBP20.63■□□□□ 0.89
PSPC1-203ENST00000471658 ATICP31939 592 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 FXR1P51114 621 aaKnown RBP eCLIP20.63■□□□□ 0.89
PSPC1-203ENST00000471658 WDR72Q3MJ13 1102 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 HERC6Q8IVU3 1022 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 PPM1KQ8N3J5 372 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 HASPINQ8TF76 798 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 KREMEN1Q96MU8 473 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 YME1L1Q96TA2 773 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 ARID3AQ99856 593 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 GDF15Q99988 308 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 MRPL9Q9BYD2 267 aaKnown RBP20.63■□□□□ 0.89
PSPC1-203ENST00000471658 DNAJC12Q9UKB3 198 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 SCN1AP35498 2009 aa20.63■□□□□ 0.89
PSPC1-203ENST00000471658 ITGB1P05556 798 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 RPL9P32969 192 aaKnown RBP20.62■□□□□ 0.89
PSPC1-203ENST00000471658 SLC11A1P49279 550 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 LILRA4P59901 499 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 BTG3Q14201 252 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-203ENST00000471658 ARHGAP44Q17R89 818 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 SCARA5Q6ZMJ2 495 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 GPIHBP1Q8IV16 184 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 LRRC43Q8N309 656 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 LRRC52Q8N7C0 313 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 ZBED2Q9BTP6 218 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 NAA15Q9BXJ9 866 aaKnown RBP20.62■□□□□ 0.89
PSPC1-203ENST00000471658 IMPG2Q9BZV3 1241 aa20.62■□□□□ 0.89
PSPC1-203ENST00000471658 UBE2OQ9C0C9 1292 aaKnown RBP20.62■□□□□ 0.89
PSPC1-203ENST00000471658 PRG3Q9Y2Y8 225 aaPredicted RBP20.62■□□□□ 0.89
PSPC1-203ENST00000471658 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.62■□□□□ 0.894e-8■■■□□ 19.1
PSPC1-203ENST00000471658 GRXCR1A8MXD5 290 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 NT5C1B-RDH14C9J2C7 533 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 NRP1O14786 923 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 CASP14P31944 242 aa20.61■□□□□ 0.89
PSPC1-203ENST00000471658 TAF6P49848 677 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms