RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 GRAMD1CQ8IYS0 662 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 SYCP3Q8IZU3 236 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 GLIS3Q8NEA6 775 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-204ENST00000471396 POMGNT1Q8WZA1 660 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 HPS3Q969F9 1004 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 PAGE5Q96GU1 130 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 MSLNLQ96KJ4 702 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 KLHL5Q96PQ7 755 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 TSPAN18Q96SJ8 248 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 COL25A1Q9BXS0 654 aaPredicted RBP8.34□□□□□ -1.07
TRIM59-204ENST00000471396 TMEM206Q9H813 350 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 RPF1Q9H9Y2 349 aaKnown RBP8.34□□□□□ -1.07
TRIM59-204ENST00000471396 CHST7Q9NS84 486 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 TUBGCP4Q9UGJ1 667 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 CPSF3Q9UKF6 684 aaKnown RBP8.34□□□□□ -1.07
TRIM59-204ENST00000471396 AGO2Q9UKV8 859 aaKnown RBP8.34□□□□□ -1.07
TRIM59-204ENST00000471396 UBQLN1Q9UMX0 589 aaKnown RBP8.34□□□□□ -1.07
TRIM59-204ENST00000471396 FAM50BQ9Y247 325 aa8.34□□□□□ -1.07
TRIM59-204ENST00000471396 XIRP2A4UGR9 3374 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 C2CD2LO14523 706 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 TEX28O15482 410 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 MBTPS2O43462 519 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 XPOTO43592 962 aaKnown RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 ADH1AP07327 375 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 ADRB2P07550 413 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 IL9P15248 144 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 GARTP22102 1010 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 ADSSP30520 456 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 RPL9P32969 192 aaKnown RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 ACOT2P49753 483 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 CLCNKBP51801 687 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 CLUL1Q15846 466 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 RTP2Q5QGT7 225 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 FAM171A1Q5VUB5 890 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 ANKRD54Q6NXT1 300 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 LLGL2Q6P1M3 1020 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 CD300LGQ6UXG3 332 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 EPM2AIP1Q7L775 607 aaPredicted RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 SMRP1Q8NCR6 262 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 C3orf58Q8NDZ4 430 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 SLC22A17Q8WUG5 538 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 RIN2Q8WYP3 895 aaPredicted RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 PIK3R5Q8WYR1 880 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 C18orf25Q96B23 403 aaPredicted RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 B3GALT6Q96L58 329 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 UHRF1Q96T88 793 aaPredicted RBP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 GOLPH3LQ9H4A5 285 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 RXFP1Q9HBX9 757 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.33□□□□□ -1.08
TRIM59-204ENST00000471396 EXOC1Q9NV70 894 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
TRIM59-204ENST00000471396 GOLGA6L4A6NEF3 574 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 LACTBL1A8MY62 500 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 DLL1O00548 723 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 KIAA0391O15091 583 aaKnown RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 TRAPPC3O43617 180 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 KLRC4O43908 158 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 GLUD1P00367 558 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 NFICP08651 508 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 EPCAMP16422 314 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 HOXB8P17481 243 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 CYP3A5P20815 502 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 FGFR3P22607 806 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 IGFBP6P24592 240 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 KLRC2P26717 231 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 LRPAP1P30533 357 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 CLCN4P51793 760 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 SPAG1Q07617 926 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 TMEM132DQ14C87 1099 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 SMAD2Q15796 467 aaKnown RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 ZBTB6Q15916 424 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 BMT2Q1RMZ1 405 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 JADE1Q6IE81 842 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 ARMCX5Q6P1M9 558 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 PDXDC1Q6P996 788 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 SYCE2Q6PIF2 218 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 CRELD2Q6UXH1 353 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 KRBA2Q6ZNG9 492 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 HS2ST1Q7LGA3 356 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 CEP57Q86XR8 500 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 BRSK2Q8IWQ3 736 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 BEST2Q8NFU1 509 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 ZNF507Q8TCN5 953 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 SCFD1Q8WVM8 642 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 SAAL1Q96ER3 474 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 CCDC34Q96HJ3 373 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 NECAB3Q96P71 396 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 CBWD1Q9BRT8 395 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 TTPALQ9BTX7 342 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 ASB7Q9H672 318 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 FNIP2Q9P278 1114 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 DERAQ9Y315 318 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 C2CD2Q9Y426 696 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 USP15Q9Y4E8 981 aaPredicted RBP8.32□□□□□ -1.08
TRIM59-204ENST00000471396 NUB1Q9Y5A7 615 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 PLXNA3P51805 1871 aa8.32□□□□□ -1.08
TRIM59-204ENST00000471396 SCN1AP35498 2009 aa8.31□□□□□ -1.08
TRIM59-204ENST00000471396 I3L4J1 428 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms