RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 DMAC2Q9NW81 257 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 MTMR10Q9NXD2 777 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 KLK14Q9P0G3 267 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ARHGAP20Q9P2F6 1191 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 GNEQ9Y223 722 aaKnown RBP6.14□□□□□ -1.43
HDAC8-216ENST00000470998 HYOU1Q9Y4L1 999 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PCDHA13Q9Y5I0 950 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ALPK3Q96L96 1907 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 ASTN1O14525 1302 aa6.14□□□□□ -1.43
HDAC8-216ENST00000470998 PARP14Q460N5 1801 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 RBM47A0AV96 593 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GRID2IPA4D2P6 1211 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 RNF225M0QZC1 329 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 NFIBO00712 420 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 FANCGO15287 622 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 DHX15O43143 795 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 EFSO43281 561 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GAS2O43903 313 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 KPNA6O60684 536 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 AKAP3O75969 853 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 ZRANB2O95218 330 aaKnown RBP eCLIP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 MYBP10242 640 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 ARAFP10398 606 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 UCHL3P15374 230 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GTF2H1P32780 548 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 EIF4A3P38919 411 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 STAT1P42224 750 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 MAGEA1P43355 309 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 ALDH5A1P51649 535 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 NCKAP1LP55160 1127 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 NPEPPSP55786 919 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 SNAP25P60880 206 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 PSMC6P62333 389 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GTF2BQ00403 316 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 KLHL30Q0D2K2 578 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 DMP1Q13316 513 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 PPIGQ13427 754 aaKnown RBP eCLIP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 BAATQ14032 418 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 CTTNQ14247 550 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 OCLNQ16625 522 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 PTPN21Q16825 1174 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 C11orf91Q3C1V1 193 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 DUSP28Q4G0W2 176 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GLE1Q53GS7 698 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 BRDTQ58F21 947 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 MUM1L1Q5H9M0 696 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 TEX35Q5T0J7 233 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 KLHDC7AQ5VTJ3 777 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 ARHGEF16Q5VV41 709 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 IER5Q5VY09 327 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 HGSNATQ68CP4 663 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 PPP1R2P3Q6NXS1 205 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 TAPT1Q6NXT6 567 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 NSMFQ6X4W1 530 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 TLK2Q86UE8 772 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 VSIG10LQ86VR7 867 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 FAM126BQ8IXS8 530 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 EXOC8Q8IYI6 725 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 SYCE1Q8N0S2 351 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 SLC43A3Q8NBI5 491 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 LMBR1Q8WVP7 490 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.13□□□□□ -1.434e-7■■■■■ 56.2
HDAC8-216ENST00000470998 TBC1D5Q92609 795 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 SLC35C1Q96A29 364 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 ACDQ96AP0 544 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 LENG1Q96BZ8 264 aaPredicted RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 MYO19Q96H55 970 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 RNPC3Q96LT9 517 aaKnown RBP6.13□□□□□ -1.43
HDAC8-216ENST00000470998 FIZ1Q96SL8 496 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 KIAA1586Q9HCI6 787 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 AGPAT3Q9NRZ7 376 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 RGL1Q9NZL6 768 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GCNT4Q9P109 453 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 TBX21Q9UL17 535 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 GUCA1BQ9UMX6 200 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 SNX12Q9UMY4 172 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 USP20Q9Y2K6 914 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 PCDHGC5Q9Y5F6 944 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 PCDHA10Q9Y5I2 948 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 FRMPD3Q5JV73 1810 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 CEP290O15078 2479 aa6.13□□□□□ -1.43
HDAC8-216ENST00000470998 MYADML2A6NDP7 307 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 K7ENM7 598 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 DYNC1LI2O43237 492 aaPredicted RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 TGFB1I1O43294 461 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 CHMP2AO43633 222 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 HIP1RO75146 1068 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 NOL4O94818 638 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 PRPF6O94906 941 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 CD4P01730 458 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 PSAPP07602 524 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 PFKMP08237 780 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 SUPT20HL2P0C7V6 817 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 ARP10275 920 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 EDNRBP24530 442 aa6.12□□□□□ -1.43
HDAC8-216ENST00000470998 YWHABP31946 246 aaKnown RBP6.12□□□□□ -1.43
HDAC8-216ENST00000470998 ICAM3P32942 547 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms