RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 PCDHB2Q9Y5E7 798 aa6.55□□□□□ -1.36
VARS-222ENST00000470953 VWA8A3KMH1 1905 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 NFASCO94856 1347 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 hCG_1642624A0A1W2PR95 340 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 SLC38A8A6NNN8 435 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 CPLX1O14810 134 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 MAFGO15525 162 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 ZNF623O75123 536 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 RHOP08100 348 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 HSPA4P34932 840 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 CCR2P41597 374 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 ADCY7P51828 1080 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 DSC1Q08554 894 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 PON2Q15165 354 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 ADCK5Q3MIX3 580 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 PREPLQ4J6C6 727 aaPredicted RBP6.54□□□□□ -1.36
VARS-222ENST00000470953 C2orf27AQ580R0 203 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 UBXN11Q5T124 520 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 FUT10Q6P4F1 479 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 SLC23A3Q6PIS1 610 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 Q6ZUG5 572 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 ARMCX6Q7L4S7 300 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 GLRX5Q86SX6 157 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 CKAP2LQ8IYA6 745 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 RASEFQ8IZ41 740 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 GALNT15Q8N3T1 639 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 URGCPQ8TCY9 931 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 CCDC12Q8WUD4 166 aaPredicted RBP6.54□□□□□ -1.36
VARS-222ENST00000470953 NLRP7Q8WX94 980 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 BRF1Q92994 677 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 NXPE2Q96DL1 559 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 RSPRY1Q96DX4 576 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 SCLT1Q96NL6 688 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 KIF2CQ99661 725 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 MXRA8Q9BRK3 442 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 SDF4Q9BRK5 362 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 REPIN1Q9BWE0 567 aaKnown RBP6.54□□□□□ -1.36
VARS-222ENST00000470953 RNF39Q9H2S5 420 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 PSTPIP2Q9H939 334 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 RSAD1Q9HA92 442 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 AGO4Q9HCK5 861 aaKnown RBP6.54□□□□□ -1.36
VARS-222ENST00000470953 ZFP14Q9HCL3 533 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 TRPV5Q9NQA5 729 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 GDE1Q9NZC3 331 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 TCEAL9Q9UHQ7 104 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 CYP46A1Q9Y6A2 500 aa6.54□□□□□ -1.36
VARS-222ENST00000470953 CNTNAP5Q8WYK1 1306 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 A0A087WZ62 844 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 GOLGA8CPA6NN73 597 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 E9PAM4 449 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 hCG_1984214I3L0E3 225 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 DHX15O43143 795 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 CBFA2T3O75081 653 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 XYLBO75191 536 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 DKK1O94907 266 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 CFIP05156 583 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 ATXN1LP0C7T5 689 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 CPA1P15085 419 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 PSMC3P17980 439 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 RPS6KB1P23443 525 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 SMARCA1P28370 1054 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 HOXA9P31269 272 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 RCAN1P53805 252 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 TMPRSS3P57727 454 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 USP41Q3LFD5 358 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 TSGA10IPQ3SY00 556 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 PRSS36Q5K4E3 855 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 AXDND1Q5T1B0 1012 aaPredicted RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 LIN9Q5TKA1 542 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 KIAA1614Q5VZ46 1190 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 PPP1R18Q6NYC8 613 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 CPLX2Q6PUV4 134 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 MRPL10Q7Z7H8 261 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 GPIHBP1Q8IV16 184 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 HOMEZQ8IX15 550 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 TRIM22Q8IYM9 498 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 MMP21Q8N119 569 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 ZNF710Q8N1W2 664 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 SRBD1Q8N5C6 995 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 CAMKK1Q8N5S9 505 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 ZNF713Q8N859 430 aaPredicted RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 EXD3Q8N9H8 876 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 SMG8Q8ND04 991 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 RSPH1Q8WYR4 309 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 PKNOX2Q96KN3 472 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 ZFP42Q96MM3 310 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 ASB16Q96NS5 453 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 MAP7D2Q96T17 732 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 FDXACB1Q9BRP7 624 aaPredicted RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 PI4K2AQ9BTU6 479 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 GLT8D2Q9H1C3 349 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.53□□□□□ -1.36
VARS-222ENST00000470953 DNAAF2Q9NVR5 837 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 PCDHA6Q9UN73 950 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 PCDHA8Q9Y5H6 950 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 MAFBQ9Y5Q3 323 aaPredicted RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 SNX14Q9Y5W7 946 aa6.53□□□□□ -1.36
VARS-222ENST00000470953 MYH9P35579 1960 aaKnown RBP6.53□□□□□ -1.36
VARS-222ENST00000470953 CSMD2Q7Z408 3487 aa6.52□□□□□ -1.37
VARS-222ENST00000470953 WDR27A2RRH5 827 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms