RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 MCOLN1Q9GZU1 580 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 TSPYL2Q9H2G4 693 aaPredicted RBP16.26■□□□□ 0.19
COL4A5-203ENST00000470339 APOBEC3GQ9HC16 384 aaKnown RBP16.26■□□□□ 0.19
COL4A5-203ENST00000470339 SLC38A7Q9NVC3 462 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 TBX21Q9UL17 535 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 CNTN6Q9UQ52 1028 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 NUB1Q9Y5A7 615 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 SCN1AP35498 2009 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 SCN5AQ14524 2016 aa16.26■□□□□ 0.19
COL4A5-203ENST00000470339 EIF3CLB5ME19 914 aaKnown RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 C9IYK1 514 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 INPPL1O15357 1258 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 ZSCAN12O43309 604 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 EVI5O60447 810 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 NBNO60934 754 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 NDUFA10O95299 355 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 LCA5LO95447 670 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 P4HA1P13674 534 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 RFC2P35250 354 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 EIF4A3P38919 411 aaKnown RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 GPNMBQ14956 572 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 ASTE1Q2TB18 679 aaPredicted RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF699Q32M78 642 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 AGMOQ6ZNB7 445 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF598Q86UK7 904 aaKnown RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 RTN4RL1Q86UN2 441 aaPredicted RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 PPP1R10Q96QC0 940 aaKnown RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 EIF3CQ99613 913 aaKnown RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 RNF216Q9NWF9 866 aaPredicted RBP16.25■□□□□ 0.19
COL4A5-203ENST00000470339 KLK14Q9P0G3 267 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 AGAP1Q9UPQ3 857 aa16.25■□□□□ 0.19
COL4A5-203ENST00000470339 TET1Q8NFU7 2136 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ANO9A1A5B4 782 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 IPO7O95373 1038 aaKnown RBP16.24■□□□□ 0.19
COL4A5-203ENST00000470339 KRT19P08727 400 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 CLTBP09497 229 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 CCDC175P0C221 793 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ATF7P17544 494 aaPredicted RBP16.24■□□□□ 0.19
COL4A5-203ENST00000470339 LRPAP1P30533 357 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 POLR2BP30876 1174 aaKnown RBP16.24■□□□□ 0.19
COL4A5-203ENST00000470339 BPIFB4P59827 614 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 YWHAEP62258 255 aaKnown RBP16.24■□□□□ 0.19
COL4A5-203ENST00000470339 KRT83P78385 493 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ARID5AQ03989 594 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 MYO1EQ12965 1108 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 MTF1Q14872 753 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF667Q5HYK9 610 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 SPOPLQ6IQ16 392 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 VPS36Q86VN1 386 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 CCAR2Q8N163 923 aaKnown RBP16.24■□□□□ 0.19
COL4A5-203ENST00000470339 TTC39CQ8N584 583 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 KAT5Q92993 513 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 HPDLQ96IR7 371 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 DEF6Q9H4E7 631 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 HAUS4Q9H6D7 363 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ELAC1Q9H777 363 aaKnown RBP16.24■□□□□ 0.19
COL4A5-203ENST00000470339 CYP3A43Q9HB55 503 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 TMEM39AQ9NV64 488 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ATP11BQ9Y2G3 1177 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 ADGRG1Q9Y653 693 aa16.24■□□□□ 0.19
COL4A5-203ENST00000470339 TTC3P53804 2025 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 GOLGA6L9A6NEM1 432 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 ARL5CA6NH57 179 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 RBAK-RBAKDNI3L0D1 243 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 PIRO00625 290 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 PTGESO14684 152 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 AKR1B10O60218 316 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 OFD1O75665 1012 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 THP07101 528 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 ACO1P21399 889 aaKnown RBP16.23■□□□□ 0.19
COL4A5-203ENST00000470339 PNPLA4P41247 253 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 PTK2Q05397 1052 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 LRRC26Q2I0M4 334 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 TDRD12Q587J7 1177 aaKnown RBP16.23■□□□□ 0.19
COL4A5-203ENST00000470339 C9orf57Q5W0N0 161 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 TOGARAM2Q6ZUX3 1019 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 UBR7Q8N806 425 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 GSTCDQ8NEC7 633 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 C18orf25Q96B23 403 aaPredicted RBP16.23■□□□□ 0.19
COL4A5-203ENST00000470339 RPS6KC1Q96S38 1066 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 BCO2Q9BYV7 579 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 CXCL16Q9H2A7 254 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 RSAD1Q9HA92 442 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.23■□□□□ 0.19
COL4A5-203ENST00000470339 SPTLC3Q9NUV7 552 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 PPP2R2CQ9Y2T4 447 aa16.23■□□□□ 0.19
COL4A5-203ENST00000470339 ENPP3O14638 875 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 PLEKP08567 350 aaPredicted RBP16.22■□□□□ 0.19
COL4A5-203ENST00000470339 PAX3P23760 479 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 CLCN1P35523 988 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 KIF11P52732 1056 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 BMS1Q14692 1282 aaKnown RBP16.22■□□□□ 0.19
COL4A5-203ENST00000470339 SPA17Q15506 151 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 SLC18A3Q16572 532 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 WDR72Q3MJ13 1102 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 C10orf76Q5T2E6 689 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 SCARA3Q6AZY7 606 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF662Q6ZS27 426 aa16.22■□□□□ 0.19
COL4A5-203ENST00000470339 ZNF571Q7Z3V5 609 aaPredicted RBP16.22■□□□□ 0.19
COL4A5-203ENST00000470339 UBE2Q1Q7Z7E8 422 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms