RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ARNTP27540 789 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 ARL4DP49703 201 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 MRE11P49959 708 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 CLCN3P51790 818 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 ZNF131P52739 623 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 ASIC1P78348 528 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 AMPD3Q01432 767 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 C19orf57Q0VDD7 668 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 STK4Q13043 487 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 COASYQ13057 564 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 PPFIA1Q13136 1202 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 PAK2Q13177 524 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 CAMK2GQ13555 558 aaPredicted RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 EMC2Q15006 297 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 BRDTQ58F21 947 aaPredicted RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 LRSAM1Q6UWE0 723 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 UNC13DQ70J99 1090 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 KSR1Q8IVT5 923 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 SULF2Q8IWU5 870 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 TRIM42Q8IWZ5 723 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 SMYD4Q8IYR2 804 aaPredicted RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 LINC01465Q8N7H1 131 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 PCSK9Q8NBP7 692 aaKnown RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 DIS3LQ8TF46 1054 aaKnown RBP5.21□□□□□ -1.57
SF3B1-208ENST00000470268 TMEM143Q96AN5 459 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 NT5C1AQ9BXI3 368 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 KCND2Q9NZV8 630 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 GDAQ9Y2T3 454 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 PCDHA2Q9Y5H9 948 aa5.21□□□□□ -1.57
SF3B1-208ENST00000470268 PVALEFA0A1B0GWK0 134 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 LINC01387J3KSC0 135 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 DNM1LO00429 736 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 FSCN2O14926 492 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ZEB2O60315 1214 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 KPNA6O60684 536 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 RHOBTB3O94955 611 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 PF4P02776 101 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 MYL1P05976 194 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 NOS3P29474 1203 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ARL2P36404 184 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 CASP5P51878 434 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 POLGP54098 1239 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ITGA7Q13683 1181 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 MORC3Q14149 939 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 DPCR1Q3MIW9 517 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF484Q5JVG2 852 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 L1TD1Q5T7N2 865 aaKnown RBP5.21□□□□□ -1.58
SF3B1-208ENST00000470268 FAM102BQ5T8I3 360 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 FBXL19Q6PCT2 694 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 MTHFD1LQ6UB35 978 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 RUFY4Q6ZNE9 571 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 PRR23CQ6ZRP0 262 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 PDZD3Q86UT5 571 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 SFR1Q86XK3 245 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 KRTAP19-1Q8IUB9 90 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 KLHL23Q8NBE8 558 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ARRDC4Q8NCT1 418 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 KIAA0895Q8NCT3 520 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 SLC7A3Q8WY07 619 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 SMARCE1Q969G3 411 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 SYAP1Q96A49 352 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF668Q96K58 619 aaPredicted RBP5.21□□□□□ -1.58
SF3B1-208ENST00000470268 GSDMAQ96QA5 445 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 MED15Q96RN5 788 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 KIFC3Q9BVG8 833 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 KATNAL1Q9BW62 490 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ZHX3Q9H4I2 956 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 SUGCTQ9HAC7 445 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ATP6V0A4Q9HBG4 840 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 PANK4Q9NVE7 773 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 TBC1D7Q9P0N9 293 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 GTF2IRD1Q9UHL9 959 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ODF2LQ9ULJ1 636 aa5.21□□□□□ -1.58
SF3B1-208ENST00000470268 ADGRA3Q8IWK6 1321 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 NRCAMQ92823 1304 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 COL1A2P08123 1366 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 TM4SF5O14894 197 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 CYP11A1P05108 521 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 KRT18P05783 430 aaKnown RBP5.2□□□□□ -1.58
SF3B1-208ENST00000470268 COL6A1P12109 1028 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 GLRA2P23416 452 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 NMT1P30419 496 aaKnown RBP5.2□□□□□ -1.58
SF3B1-208ENST00000470268 NPTX2P47972 431 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 PEX3P56589 373 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 ZNF252P-AS1Q0IIN9 211 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 KCNB1Q14721 858 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 HERC4Q5GLZ8 1057 aaPredicted RBP5.2□□□□□ -1.58
SF3B1-208ENST00000470268 FAM47CQ5HY64 1035 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 EFCAB12Q6NXP0 572 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 NFRKBQ6P4R8 1299 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 SESTD1Q86VW0 696 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 KIAA0319LQ8IZA0 1049 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 METTL13Q8N6R0 699 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 C7orf31Q8N865 590 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 MCPH1Q8NEM0 835 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 PRPF31Q8WWY3 499 aaKnown RBP5.2□□□□□ -1.58
SF3B1-208ENST00000470268 GLT1D1Q96MS3 346 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 CCDC43Q96MW1 224 aaKnown RBP5.2□□□□□ -1.58
SF3B1-208ENST00000470268 NRSN2Q9GZP1 204 aa5.2□□□□□ -1.58
SF3B1-208ENST00000470268 POLR3FQ9H1D9 316 aaPredicted RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms