RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 FAM200AQ8TCP9 573 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 BSNDQ8WZ55 320 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
CCDC171-204ENST00000470191 KCNB2Q92953 911 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 PRIMPOLQ96LW4 560 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 ZNF512Q96ME7 567 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-204ENST00000470191 PPP1R10Q96QC0 940 aaKnown RBP10.04□□□□□ -0.8
CCDC171-204ENST00000470191 KIFC3Q9BVG8 833 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 FZD8Q9H461 694 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 TTC12Q9H892 705 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-204ENST00000470191 AVENQ9NQS1 362 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-204ENST00000470191 BACE2Q9Y5Z0 518 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 ANK1P16157 1881 aa10.04□□□□□ -0.8
CCDC171-204ENST00000470191 NUP210Q8TEM1 1887 aaPredicted RBP10.04□□□□□ -0.8
CCDC171-204ENST00000470191 TMEM189-UBE2V1I3L0A0 370 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 K7ESF4 209 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 ABLIM3O94929 683 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 SOX4Q06945 474 aaPredicted RBP10.03□□□□□ -0.8
CCDC171-204ENST00000470191 NR5A1Q13285 461 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 PON2Q15165 354 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 MAPK6Q16659 721 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 UPP1Q16831 310 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 CTXN3Q4LDR2 81 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 WDR44Q5JSH3 913 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 IQCEQ6IPM2 695 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 RUFY3Q7L099 469 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 MFSD6LQ8IWD5 586 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 DEPTORQ8TB45 409 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 RSPRY1Q96DX4 576 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 ZFYVE19Q96K21 471 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 NAP1L4Q99733 375 aaKnown RBP10.03□□□□□ -0.8
CCDC171-204ENST00000470191 HSD17B14Q9BPX1 270 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 IER2Q9BTL4 223 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 C2orf40Q9H1Z8 148 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 CEP72Q9P209 647 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 SPAG17Q6Q759 2223 aa10.03□□□□□ -0.8
CCDC171-204ENST00000470191 ZNF638Q14966 1978 aaKnown RBP10.03□□□□□ -0.8
CCDC171-204ENST00000470191 CHD6Q8TD26 2715 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 SMIM28A0A1B0GU29 152 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 C1QTNF9BB2RNN3 333 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 H7C4K7 107 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 PODXLO00592 558 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 MOSPD3O75425 235 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 LYPLA2O95372 231 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 C1QTNF9P0C862 333 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CCDC192P0DO97 292 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CPB1P15086 417 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 ATF2P15336 505 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 XBP1P17861 261 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 SPINK2P20155 84 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CNR2P34972 360 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 RBM25P49756 843 aaKnown RBP10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CDR1P51861 262 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 EVCP57679 992 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 FAM187BQ17R55 369 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 STXBP5Q5T5C0 1151 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 STPG1Q5TH74 334 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CDCA2Q69YH5 1023 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-204ENST00000470191 SLC8B1Q6J4K2 584 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 PSAPL1Q6NUJ1 521 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 TXNDC11Q6PKC3 985 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 RTL10Q7L3V2 364 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 KBTBD6Q86V97 674 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 TCEAL8Q8IYN2 117 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 TMEM130Q8N3G9 435 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 FBXL16Q8N461 479 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CEP120Q8N960 986 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 MCPH1Q8NEM0 835 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 SHKBP1Q8TBC3 707 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 DEPDC1BQ8WUY9 529 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 ZNF274Q96GC6 653 aaPredicted RBP10.02□□□□□ -0.81
CCDC171-204ENST00000470191 UROC1Q96N76 676 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 ASAH2Q9NR71 780 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 FBXL5Q9UKA1 691 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 NUB1Q9Y5A7 615 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CYP46A1Q9Y6A2 500 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 CACNA1GO43497 2377 aa10.02□□□□□ -0.81
CCDC171-204ENST00000470191 A0A1W2PRU2 124 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 SPECC1L-ADORA2AF8WAN1 911 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 ACKR2O00590 384 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 WNT7AO00755 349 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 EXTL3O43909 919 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 MED24O75448 989 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 KCNK5O95279 499 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 HARSP12081 509 aaKnown RBP10.01□□□□□ -0.81
CCDC171-204ENST00000470191 KRT2P35908 639 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 YARSP54577 528 aaKnown RBP10.01□□□□□ -0.81
CCDC171-204ENST00000470191 DCAF4L1Q3SXM0 396 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 NT5DC1Q5TFE4 455 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 PKN3Q6P5Z2 889 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 RNF19BQ6ZMZ0 732 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 WDR5BQ86VZ2 330 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 TCEAL3Q969E4 200 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 C18orf25Q96B23 403 aaPredicted RBP10.01□□□□□ -0.81
CCDC171-204ENST00000470191 PGLYRP2Q96PD5 576 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 CCDC113Q9H0I3 377 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 TRPV5Q9NQA5 729 aa10.01□□□□□ -0.81
CCDC171-204ENST00000470191 POLR3BQ9NW08 1133 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms