RNA–Protein interactions for RNA: ENST00000469896.1

COMMD2-202, Transcript of COMM domain containing 2, humanhuman

TSL 1 (best)

Gene COMMD2, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD2-202ENST00000469896 UGCGQ16739 394 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 PKN3Q6P5Z2 889 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 ZNF843Q8N446 348 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 NCOA7Q8NI08 942 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 ZNF461Q8TAF7 563 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 TTC8Q8TAM2 541 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 ADAMTS14Q8WXS8 1223 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 SLC7A3Q8WY07 619 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 GTSE1Q9NYZ3 720 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 DKK4Q9UBT3 224 aa12.5□□□□□ -0.41
COMMD2-202ENST00000469896 A0A087WV48 116 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CHMP2AO43633 222 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CYP3A4P08684 503 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CALM1P0DP23 149 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CALM2P0DP24 149 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CALM3P0DP25 149 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 ENGP17813 658 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CCR2P41597 374 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 DPP6P42658 865 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 ABCG1P45844 678 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 DHPSP49366 369 aaPredicted RBP12.49□□□□□ -0.41
COMMD2-202ENST00000469896 PLCB2Q00722 1185 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 KCNC4Q03721 635 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 PRR16Q569H4 304 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 PADI6Q6TGC4 694 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 NFXL1Q6ZNB6 911 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 ANKS3Q6ZW76 656 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 EXOC8Q8IYI6 725 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CCDC82Q8N4S0 544 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 GSTCDQ8NEC7 633 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 PSPC1Q8WXF1 523 aaKnown RBP12.49□□□□□ -0.41
COMMD2-202ENST00000469896 ZNF512Q96ME7 567 aaPredicted RBP12.49□□□□□ -0.41
COMMD2-202ENST00000469896 CSRNP2Q9H175 543 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 NXF3Q9H4D5 531 aaKnown RBP12.49□□□□□ -0.41
COMMD2-202ENST00000469896 MINDY3Q9H8M7 445 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 ASAH2Q9NR71 780 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 BACE2Q9Y5Z0 518 aa12.49□□□□□ -0.41
COMMD2-202ENST00000469896 GAS7O60861 476 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 MYL4P12829 197 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 AKAP5P24588 427 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 MAPK6Q16659 721 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 WWC2Q6AWC2 1192 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 SCUBE3Q8IX30 993 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 PRPF31Q8WWY3 499 aaKnown RBP12.48□□□□□ -0.41
COMMD2-202ENST00000469896 PAAF1Q9BRP4 392 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 CYP4F11Q9HBI6 524 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 PARP2Q9UGN5 583 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 PCDHB9Q9Y5E1 797 aa12.48□□□□□ -0.41
COMMD2-202ENST00000469896 SMCO2A6NFE2 343 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 CCDC69A6NI79 296 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 TSPAN1O60635 241 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 OPHN1O60890 802 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 RNF40O75150 1001 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 NTRK1P04629 796 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 FGFR3P22607 806 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 DGKEP52429 567 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 AMPD2Q01433 879 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 TEAD2Q15562 447 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 TRIP6Q15654 476 aaKnown RBP12.47□□□□□ -0.41
COMMD2-202ENST00000469896 ITPRIPL2Q3MIP1 535 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 ANKRD45Q5TZF3 282 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 SYT13Q7L8C5 426 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 TCEAL8Q8IYN2 117 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 TMTC2Q8N394 836 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 RDM1Q8NG50 284 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 IGDCC4Q8TDY8 1250 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 EXOC4Q96A65 974 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 ACDQ96AP0 544 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 RIT2Q99578 217 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 SH2D3AQ9BRG2 576 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 KLK14Q9P0G3 267 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 CACNG4Q9UBN1 327 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 INSL5Q9Y5Q6 135 aa12.47□□□□□ -0.41
COMMD2-202ENST00000469896 PTPN13Q12923 2485 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 NCANO14594 1321 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 TMEM150BA6NC51 233 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 hCG_1984214I3L0E3 225 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 TRAPPC3O43617 180 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 FTH1P19P0C7X4 201 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 ATF2P15336 505 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 FAM193AP78312 1265 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 ROR1Q01973 937 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 LAMTOR4Q0VGL1 99 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 FBXO43Q4G163 708 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 CASC1Q6TDU7 716 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 SYT12Q8IV01 421 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.41
COMMD2-202ENST00000469896 RNF149Q8NC42 400 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 CRELD1Q96HD1 420 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 ZFYVE19Q96K21 471 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 GTPBP2Q9BX10 602 aaKnown RBP12.46□□□□□ -0.41
COMMD2-202ENST00000469896 THG1LQ9NWX6 298 aaKnown RBP12.46□□□□□ -0.41
COMMD2-202ENST00000469896 SNTG2Q9NY99 539 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 TPCN1Q9ULQ1 816 aa12.46□□□□□ -0.41
COMMD2-202ENST00000469896 APOBEC2Q9Y235 224 aaKnown RBP12.46□□□□□ -0.41
COMMD2-202ENST00000469896 INVSQ9Y283 1065 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms