RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 FTLP02792 175 aaPredicted RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 BPIFB4P59827 614 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 RSPH3Q86UC2 560 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 PCSK9Q8NBP7 692 aaKnown RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 RBBP8NLQ8NC74 664 aaPredicted RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 ZNF296Q8WUU4 475 aaPredicted RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 THAP2Q9H0W7 228 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 NXF3Q9H4D5 531 aaKnown RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 A0A0A6YYK5 440 aaPredicted RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 GRID2IPA4D2P6 1211 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 ANKRD62A6NC57 917 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 NCANO14594 1321 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 SRGAP2O75044 1071 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 RTN2O75298 545 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 CTSHP09668 335 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 CD58P19256 250 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 GUCY2FP51841 1108 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 IFI16Q16666 785 aaKnown RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 RNF180Q86T96 592 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 KIF12Q96FN5 646 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 APOL6Q9BWW8 343 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 ISCUQ9H1K1 167 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 NXF1Q9UBU9 619 aaKnown RBP19.43■□□□□ 0.7
SMC4-211ENST00000469858 C2CD2Q9Y426 696 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 TRPV2Q9Y5S1 764 aa19.43■□□□□ 0.7
SMC4-211ENST00000469858 GRIN2DO15399 1336 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 NCK2O43639 380 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 INHAP05111 366 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 YARSP54577 528 aaKnown RBP19.42■□□□□ 0.7
SMC4-211ENST00000469858 SERINC5Q86VE9 423 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 FAM228AQ86W67 206 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 CD302Q8IX05 232 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 RFFLQ8WZ73 363 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 ARHGEF26Q96DR7 871 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 CXCL16Q9H2A7 254 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 PUF60Q9UHX1 559 aaKnown RBP19.42■□□□□ 0.7
SMC4-211ENST00000469858 POLIQ9UNA4 740 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 CNTN6Q9UQ52 1028 aa19.42■□□□□ 0.7
SMC4-211ENST00000469858 NOC2LQ9Y3T9 749 aaKnown RBP19.42■□□□□ 0.7
SMC4-211ENST00000469858 PDCD11Q14690 1871 aaKnown RBP19.42■□□□□ 0.7
SMC4-211ENST00000469858 FTCDO95954 541 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 GZMAP12544 262 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 POLR2BP30876 1174 aaKnown RBP19.41■□□□□ 0.7
SMC4-211ENST00000469858 ASPAP45381 313 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 WHAMMP3Q1A5X7 153 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 ZNF667Q5HYK9 610 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 SESTD1Q86VW0 696 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 UBR7Q8N806 425 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 SNX27Q96L92 541 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 OSGEPQ9NPF4 335 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 CISHQ9NSE2 258 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 SNX12Q9UMY4 172 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 FRMPD3Q5JV73 1810 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 TADA3O75528 432 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 RECQL4O94761 1208 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 WEE2P0C1S8 567 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 GNA15P30679 374 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 WDR72Q3MJ13 1102 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 ZNF677Q86XU0 584 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 NT5DC4Q86YG4 428 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 CEP112Q8N8E3 955 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 TPCN2Q8NHX9 752 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 CXorf38Q8TB03 319 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 SLC35G2Q8TBE7 412 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 TAF4BQ92750 862 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 PLEKHA5Q9HAU0 1116 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 DPP3Q9NY33 737 aa19.41■□□□□ 0.7
SMC4-211ENST00000469858 AKAP5P24588 427 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 ARHGEF6Q15052 776 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 PTGISQ16647 500 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 UBXN11Q5T124 520 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 CAPZA3Q96KX2 299 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 PSMB7Q99436 277 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 TLR10Q9BXR5 811 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 PDCL3Q9H2J4 239 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 GOLPH3Q9H4A6 298 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 ITGA11Q9UKX5 1188 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 AGAP1Q9UPQ3 857 aa19.4■□□□□ 0.7
SMC4-211ENST00000469858 ZNF132P52740 706 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 ACLYP53396 1101 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 CLEC16AQ2KHT3 1053 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 ZNF394Q53GI3 561 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 GLRA4Q5JXX5 417 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 SLAIN1Q8ND83 568 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 ZMAT2Q96NC0 199 aaKnown RBP19.39■□□□□ 0.7
SMC4-211ENST00000469858 HYOU1Q9Y4L1 999 aa19.39■□□□□ 0.7
SMC4-211ENST00000469858 EFCAB8A8MWE9 144 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 ZNF185O15231 689 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 THAP12O43422 761 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 CHRNA1P02708 482 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 ATICP31939 592 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 RAP1GAPP47736 663 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 DNA2P51530 1060 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 ITGA7Q13683 1181 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 ELF2Q15723 593 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 ERCC6LQ2NKX8 1250 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 TWF2Q6IBS0 349 aaKnown RBP19.39■□□□□ 0.69
SMC4-211ENST00000469858 LRRC57Q8N9N7 239 aa19.39■□□□□ 0.69
SMC4-211ENST00000469858 SENP6Q9GZR1 1112 aaPredicted RBP19.39■□□□□ 0.69
SMC4-211ENST00000469858 HMX1Q9NP08 348 aaPredicted RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms