RNA–Protein interactions for RNA: ENST00000468965.2

SCAP-210, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-210ENST00000468965 ITGA11Q9UKX5 1188 aa14.14□□□□□ -0.15
SCAP-210ENST00000468965 FAN1Q9Y2M0 1017 aa14.14□□□□□ -0.15
SCAP-210ENST00000468965 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.14□□□□□ -0.15
SCAP-210ENST00000468965 CHD7Q9P2D1 2997 aa14.14□□□□□ -0.15
SCAP-210ENST00000468965 BECN2A8MW95 431 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 TMEM189-UBE2V1I3L0A0 370 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 CST3P01034 146 aaPredicted RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 ALDH2P05091 517 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 EEF1GP26641 437 aaKnown RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 POLR2BP30876 1174 aaKnown RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 GTF2H1P32780 548 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 RPL9P32969 192 aaKnown RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 FMO5P49326 533 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 MXI1P50539 228 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 AP3M2P53677 418 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 KCNH2Q12809 1159 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 KRT31Q15323 416 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 MAN2A1Q16706 1144 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 PPP2R2DQ66LE6 453 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 APTXQ7Z2E3 356 aaKnown RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 HASPINQ8TF76 798 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 TUBGCP2Q9BSJ2 902 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 GRPEL1Q9HAV7 217 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 TAB2Q9NYJ8 693 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 MAGEC2Q9UBF1 373 aaPredicted RBP14.13□□□□□ -0.15
SCAP-210ENST00000468965 AGAP1Q9UPQ3 857 aa14.13□□□□□ -0.15
SCAP-210ENST00000468965 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.13□□□□□ -0.15
SCAP-210ENST00000468965 CHD9Q3L8U1 2897 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 EPOPA6NHQ4 379 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 C5orf67F2Z3F1 127 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 SPTLC1O15269 473 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 LRRN2O75325 713 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 B3GAT3O94766 335 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 EFEMP2O95967 443 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 HLA-DRAP01903 254 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 AFPP02771 609 aaKnown RBP14.12□□□□□ -0.15
SCAP-210ENST00000468965 KRT19P08727 400 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 BRCC3P46736 316 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 ALDH7A1P49419 539 aaKnown RBP14.12□□□□□ -0.15
SCAP-210ENST00000468965 MRE11P49959 708 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 MYL6P60660 151 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 BIRC3Q13489 604 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 KRT39Q6A163 491 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 KLHL23Q8NBE8 558 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 TAS1R2Q8TE23 839 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 SEMA4DQ92854 862 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 ELMO3Q96BJ8 720 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 IGSF21Q96ID5 467 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 COLEC11Q9BWP8 271 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 VN1R3Q9BXE9 311 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 CERS4Q9HA82 394 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 SLC28A3Q9HAS3 691 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 AAASQ9NRG9 546 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 SPG21Q9NZD8 308 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 LIMA1Q9UHB6 759 aaKnown RBP14.12□□□□□ -0.15
SCAP-210ENST00000468965 MTUS1Q9ULD2 1270 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 RWDD3Q9Y3V2 267 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 PCDHB12Q9Y5F1 795 aa14.12□□□□□ -0.15
SCAP-210ENST00000468965 PMM2O15305 246 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 STX10O60499 249 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 PHACTR2O75167 634 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 FGF18O76093 207 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 PRKCSHP14314 528 aaPredicted RBP14.11□□□□□ -0.15
SCAP-210ENST00000468965 PPM1AP35813 382 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 AARSP49588 968 aaKnown RBP eCLIP14.11□□□□□ -0.15
SCAP-210ENST00000468965 COPB1P53618 953 aaKnown RBP14.11□□□□□ -0.15
SCAP-210ENST00000468965 RBP5P82980 135 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 MYL7Q01449 175 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 NCOA4Q13772 614 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 FUT10Q6P4F1 479 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 RNF168Q8IYW5 571 aaPredicted RBP14.11□□□□□ -0.15
SCAP-210ENST00000468965 LRRC52Q8N7C0 313 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 LRCH3Q96II8 777 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 SAMD11Q96NU1 681 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 PLVAPQ9BX97 442 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 GPR62Q9BZJ7 368 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 XYLT2Q9H1B5 865 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 ADAM28Q9UKQ2 775 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 COQ4Q9Y3A0 265 aa14.11□□□□□ -0.15
SCAP-210ENST00000468965 CARNS1A5YM72 827 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 I3L4J1 428 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 N4BP1O75113 896 aaKnown RBP14.1□□□□□ -0.15
SCAP-210ENST00000468965 RB1P06400 928 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 CDK11BP21127 795 aaKnown RBP14.1□□□□□ -0.15
SCAP-210ENST00000468965 PIK3CAP42336 1068 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 TAF6P49848 677 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 LILRA4P59901 499 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 VWA3BQ502W6 1294 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 TIGD5Q53EQ6 642 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 FBXO22Q8NEZ5 403 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 LMO3Q8TAP4 145 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 TMEM169Q96HH4 297 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 ZNF560Q96MR9 790 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 PI4K2AQ9BTU6 479 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 VPS16Q9H269 839 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 NDST4Q9H3R1 872 aa14.1□□□□□ -0.15
SCAP-210ENST00000468965 PRRC2BQ5JSZ5 2229 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms