RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 HLTFQ14527 1009 aaKnown RBP eCLIP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 KRT31Q15323 416 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 KRT24Q2M2I5 525 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 TRIM71Q2Q1W2 868 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 FAM133BQ5BKY9 247 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 RNF220Q5VTB9 566 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 DENND2CQ68D51 928 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 FDX2Q6P4F2 183 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PDXDC1Q6P996 788 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ADGRG6Q86SQ4 1221 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 VSIG1Q86XK7 387 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 DDX42Q86XP3 938 aaKnown RBP eCLIP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ZDHHC13Q8IUH4 622 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 GSPT2Q8IYD1 628 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ZBED8Q8IZ13 594 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 SYCE1Q8N0S2 351 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ENAHQ8N8S7 591 aaPredicted RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MIGA1Q8NAN2 632 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PHC3Q8NDX5 983 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 GDAP1Q8TB36 358 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 DEPTORQ8TB45 409 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PLEKHO2Q8TD55 490 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 NAT14Q8WUY8 206 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 SKA1Q96BD8 255 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 CRELD1Q96HD1 420 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 FAM46AQ96IP4 442 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MYRFLQ96LU7 910 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 DMRTB1Q96MA1 342 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 FRMD6Q96NE9 622 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ERGIC2Q96RQ1 377 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MAP3K14Q99558 947 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 OSMRQ99650 979 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ELAC2Q9BQ52 826 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 SIKE1Q9BRV8 207 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 IER2Q9BTL4 223 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PABPC3Q9H361 631 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PPCSQ9HAB8 311 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MAGEF1Q9HAY2 307 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PLGRKTQ9HBL7 147 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 TMEM165Q9HC07 324 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 LATS2Q9NRM7 1088 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 FGFR1OP2Q9NVK5 253 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 ZDHHC7Q9NXF8 308 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 IL20Q9NYY1 176 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MTRF1LQ9UGC7 380 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PRKAG3Q9UGI9 489 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 TSPYL4Q9UJ04 414 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 RASAL2Q9UJF2 1139 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 TMEM59LQ9UK28 342 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PLAGL2Q9UPG8 496 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 STK38LQ9Y2H1 464 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 REXO2Q9Y3B8 237 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 HBS1LQ9Y450 684 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PCDHB2Q9Y5E7 798 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 PCDHA13Q9Y5I0 950 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 MAP2P11137 1827 aaKnown RBP5.17□□□□□ -1.58
SF3B1-207ENST00000468925 BCL9LQ86UU0 1499 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 UMODL1Q5DID0 1318 aa5.17□□□□□ -1.58
SF3B1-207ENST00000468925 SPEF2Q9C093 1822 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RIMS1Q86UR5 1692 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 MRC1P22897 1456 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 TTC26A0AVF1 554 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 TRIM43BA6NCK2 446 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SIGLEC16A6NMB1 481 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 METTL12A8MUP2 240 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 WDR64B1ANS9 1081 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 E9PBE3 544 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RBAK-RBAKDNI3L0D1 243 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NFKBIEO00221 500 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PODXLO00592 558 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 GPR182O15218 404 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ZNF862O60290 1169 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CCDC22O60826 627 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 SRGAP2O75044 1071 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ADAMTS4O75173 837 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 FKBP6O75344 327 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 STAM2O75886 525 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PDE5AO76074 875 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 BAIAP3O94812 1187 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ALDH2P05091 517 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 POLR3DP05423 398 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LYNP07948 512 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 GLI1P08151 1106 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CYP21A2P08686 494 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CTSHP09668 335 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 CHN1P15882 459 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 LMNB1P20700 586 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 BMP6P22004 513 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 PPARGP37231 505 aaPredicted RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RPL5P46777 297 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 TMED10P49755 219 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 NUP107P57740 925 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 RIPPLY1Q0D2K3 151 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 ASPHQ12797 758 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 STRN3Q13033 797 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 EIF2B5Q13144 721 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 TUBA3CQ13748 450 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 HNRNPDQ14103 355 aaKnown RBP5.16□□□□□ -1.58
SF3B1-207ENST00000468925 UBE4AQ14139 1066 aa5.16□□□□□ -1.58
SF3B1-207ENST00000468925 DHX34Q14147 1143 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms