RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 SUSD3Q96L08 255 aa16.02■□□□□ 0.16
TMEM39A-205ENST00000468676 KCTD10Q9H3F6 313 aa16.02■□□□□ 0.16
TMEM39A-205ENST00000468676 TSHZ2Q9NRE2 1034 aa16.02■□□□□ 0.16
TMEM39A-205ENST00000468676 DPP3Q9NY33 737 aa16.02■□□□□ 0.16
TMEM39A-205ENST00000468676 CLEC1BQ9P126 229 aa16.02■□□□□ 0.16
TMEM39A-205ENST00000468676 HCFC2Q9Y5Z7 792 aa16.02■□□□□ 0.16
TMEM39A-205ENST00000468676 ANO9A1A5B4 782 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 CLIC2O15247 247 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 TEX28O15482 410 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 CALUO43852 315 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 PRPF40AO75400 957 aaKnown RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 BMP1P13497 986 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 BRCC3P46736 316 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 CYP2J2P51589 502 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 CLCN4P51793 760 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 DLX2Q07687 328 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 PSMD5Q16401 504 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 RTP2Q5QGT7 225 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 C9orf57Q5W0N0 161 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 PTCRAQ6ISU1 281 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 ANKRD54Q6NXT1 300 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 CBWD2Q8IUF1 395 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 ZSWIM2Q8NEG5 633 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 VN1R2Q8NFZ6 395 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 LNX1Q8TBB1 728 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 B3GALT6Q96L58 329 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 BARX2Q9UMQ3 279 aaPredicted RBP16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 PCDHA5Q9Y5H7 936 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 NCOR1O75376 2440 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 VWA8A3KMH1 1905 aa16.01■□□□□ 0.15
TMEM39A-205ENST00000468676 GRXCR2A6NFK2 248 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 H7C4K7 107 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 M0QZQ0 153 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 PIRO00625 290 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 EXOC3O60645 756 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 GLUD1P00367 558 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 PNPLA4P41247 253 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 AARSP49588 968 aaKnown RBP eCLIP16■□□□□ 0.15
TMEM39A-205ENST00000468676 KCNQ1P51787 676 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 TFAMQ00059 246 aaKnown RBP16■□□□□ 0.15
TMEM39A-205ENST00000468676 SMAD4Q13485 552 aaKnown RBP16■□□□□ 0.15
TMEM39A-205ENST00000468676 COBLL1Q53SF7 1204 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 ZNF658Q5TYW1 1059 aaPredicted RBP16■□□□□ 0.15
TMEM39A-205ENST00000468676 EFCAB13Q8IY85 973 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 SMRP1Q8NCR6 262 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 HDAC7Q8WUI4 952 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 GBP4Q96PP9 640 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 OXCT2Q9BYC2 517 aaPredicted RBP16■□□□□ 0.15
TMEM39A-205ENST00000468676 PDE11AQ9HCR9 933 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 DMAC2Q9NW81 257 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 MTRRQ9UBK8 725 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 ITGA11Q9UKX5 1188 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 PCDHB8Q9UN66 801 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 TRAF3IP3Q9Y228 551 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 BACE2Q9Y5Z0 518 aa16■□□□□ 0.15
TMEM39A-205ENST00000468676 MTCL1Q9Y4B5 1905 aaKnown RBP16■□□□□ 0.15
TMEM39A-205ENST00000468676 I3L4J1 428 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 TULP1O00294 542 aaPredicted RBP15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 TNNC2P02585 160 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 TMEM191BP0C7N4 346 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 IGFBP6P24592 240 aaPredicted RBP15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 RPL13P26373 211 aaKnown RBP15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 TKTP29401 623 aaKnown RBP15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 GUCY2FP51841 1108 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 LILRA4P59901 499 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 ITIH3Q06033 890 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 CYP24A1Q07973 514 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 PSMD6Q15008 389 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 NFIL3Q16649 462 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 DUOXA2Q1HG44 320 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 PRSS55Q6UWB4 352 aaPredicted RBP15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 WDR49Q8IV35 697 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 ANKRD36BP1Q96IX9 119 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 FNBP1Q96RU3 617 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 CLSTN3Q9BQT9 956 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 PLEKHA4Q9H4M7 779 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 FRMD4BQ9Y2L6 1034 aa15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 R3HCC1Q9Y3T6 440 aaKnown RBP15.99■□□□□ 0.15
TMEM39A-205ENST00000468676 MBTPS2O43462 519 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 NR3C1P04150 777 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 EPCAMP16422 314 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 SCN1AP35498 2009 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 PPP1R2P41236 205 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 TAF6P49848 677 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 RBM10P98175 930 aaKnown RBP15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 MRPL58Q14197 206 aaKnown RBP15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 CLUL1Q15846 466 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 VARS2Q5ST30 1063 aaKnown RBP15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 CES5AQ6NT32 575 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 DSTYKQ6XUX3 929 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 RDH13Q8NBN7 331 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 MFSD14AQ96MC6 490 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 ZNF560Q96MR9 790 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 INTS13Q9NVM9 706 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 PRKAG3Q9UGI9 489 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 DSEQ9UL01 958 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 MAPK8IP1Q9UQF2 711 aa15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 TCF20Q9UGU0 1960 aaKnown RBP15.98■□□□□ 0.15
TMEM39A-205ENST00000468676 SPTBN5Q9NRC6 3674 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms