RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 ADAMTS6Q9UKP5 1117 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 PLA2G2DQ9UNK4 145 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 CTNND2Q9UQB3 1225 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 CRYL1Q9Y2S2 319 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 RBM8AQ9Y5S9 174 aaKnown RBP4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 ACTL7AQ9Y615 435 aa4.36□□□□□ -1.71
HMGB1P25-201ENST00000468402 PRDM2Q13029 1718 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 PIP5K1BO14986 540 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 KIAA0391O15091 583 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 NCAM2O15394 837 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 ITGA10O75578 1167 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 CYP7B1O75881 506 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 MBD4O95243 580 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 MT-ND5P03915 603 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 HMGCRP04035 888 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 GNAI2P04899 355 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 RNASE1P07998 156 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 CNTFP26441 200 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 MC3RP41968 323 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 CARSP49589 748 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 ARFIP2P53365 341 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 SESN2P58004 480 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 CTXN1P60606 82 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 MXRA7P84157 204 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 DUSP2Q05923 314 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 GALNT1Q10472 559 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 ADAM15Q13444 863 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 SPARCL1Q14515 664 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 FBLN7Q53RD9 439 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 LMBRD2Q68DH5 695 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 FAAH2Q6GMR7 532 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRMT10BQ6PF06 316 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 KRBA2Q6ZNG9 492 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 GALNT15Q8N3T1 639 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 FANCBQ8NB91 859 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 PPP1R14CQ8TAE6 165 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 SMARCC2Q8TAQ2 1214 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 MDM1Q8TC05 714 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 IPO4Q8TEX9 1081 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 CPA5Q8WXQ8 436 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 USP13Q92995 863 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 NMD3Q96D46 503 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 KIRREL1Q96J84 757 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 PPM1MQ96MI6 270 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 WRNIP1Q96S55 665 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 TMEM120AQ9BXJ8 343 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 EIF2AQ9BY44 585 aaKnown RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 HAPLN2Q9GZV7 340 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 BRD9Q9H8M2 597 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 SIRT5Q9NXA8 310 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 MOCS1Q9NZB8 636 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 NCDNQ9UBB6 729 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 ZNF212Q9UDV6 495 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRPS1Q9UHF7 1281 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 PGAP2Q9UHJ9 254 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 ARID1BQ8NFD5 2236 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 SYNJ1O43426 1573 aa4.35□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRIM43BA6NCK2 446 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 AQP12BA6NM10 295 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 NT5C1B-RDH14C9J2C7 533 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 ACKR2O00590 384 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 GRM6O15303 877 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 ARHGAP6O43182 974 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 TEX33O43247 280 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 MAFO75444 373 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 NDST3O95803 873 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 GASTP01350 101 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 PRNPP04156 253 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 MTHFD1P11586 935 aaKnown RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 IDEP14735 1019 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 GYPEP15421 78 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 PFKLP17858 780 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 XBP1P17861 261 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 FPR1P21462 350 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 PCSK1P29120 753 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 VIPR1P32241 457 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CRHR1P34998 444 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 KRT9P35527 623 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 SRSF3P84103 164 aaKnown RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CTBP1Q13363 440 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CCDC93Q567U6 631 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 HYIQ5T013 277 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 TMEM200BQ69YZ2 307 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 TMEM132EQ6IEE7 984 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 ZNF605Q86T29 641 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 FAM90A1Q86YD7 464 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 SUGP1Q8IWZ8 645 aaKnown RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRMT2AQ8IZ69 625 aaKnown RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 ADGRG2Q8IZP9 1017 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 SLC15A4Q8N697 577 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 AOPEPQ8N6M6 819 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CCDC89Q8N998 374 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 PLA2G15Q8NCC3 412 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 OR5M3Q8NGP4 307 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 TRIM43Q96BQ3 446 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 CNPPD1Q9BV87 410 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 PACSIN1Q9BY11 444 aa4.34□□□□□ -1.71
HMGB1P25-201ENST00000468402 MAGEB5Q9BZ81 275 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms